(50 nodes) ATP-binding cassette (ABC) transporter complex network (Yersinia rohdei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ycjO	Binding--dependent transport system inner membrane component family protein. (296 aa)
	ugpC_1	ABC transporter family protein; Belongs to the ABC transporter superfamily. (375 aa)
	yesO	Bacterial extracellular solute-binding family protein. (429 aa)
	cbiM	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (243 aa)
	cbiN	Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (93 aa)
	cbiQ	cbiQ_TIGR: cobalt ABC transporter, permease protein CbiQ. (225 aa)
	metI_1	Binding--dependent transport system inner membrane component family protein. (223 aa)
	sfuC	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (349 aa)
	cysA	Sulfate ABC transporter, ATP-binding family protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (363 aa)
	cysW	permease_CysW: sulfate ABC transporter, permease protein CysW. (291 aa)
	modB	Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (277 aa)
	fbpC	ABC transporter family protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (363 aa)
	proV	proV: glycine betaine/L-proline transport ATP binding subunit. (399 aa)
	proW	Binding--dependent transport system inner membrane component family protein. (367 aa)
	proX	Substrate binding domain of ABC-type glycine betaine transport system family protein. (331 aa)
	metN	D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (343 aa)
	metI	D-methionine transport system permease protein metI. (217 aa)
	lptB	LPS_export_lptB: LPS export ABC transporter ATP-binding protein. (241 aa)
	malK	Maltose/maltodextrin import ATP-binding protein MalK; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family. (371 aa)
	malE	Maltose-binding periplasmic protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family. (403 aa)
	malF	Binding--dependent transport system inner membrane component family protein. (525 aa)
	malG	Binding--dependent transport system inner membrane component family protein. (296 aa)
	metN2_1	ABC transporter family protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (338 aa)
	metI_2	Binding--dependent transport system inner membrane component family protein. (219 aa)
	CH64_2832	Bacterial extracellular solute-binding family protein. (439 aa)
	ugpA_2	Binding--dependent transport system inner membrane component family protein. (295 aa)
	ugpE	Binding--dependent transport system inner membrane component family protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (281 aa)
	ugpC_3	ABC transporter family protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (357 aa)
	ugpA_1	Binding--dependent transport system inner membrane component family protein. (294 aa)
	ycjP	Binding--dependent transport system inner membrane component family protein. (279 aa)
	ugpC_2	ABC transporter family protein; Belongs to the ABC transporter superfamily. (364 aa)
	lptF	lptF_YjgP: LPS export ABC transporter permease LptF. (364 aa)
	lptG	lptG_lptG: LPS export ABC transporter permease LptG. (356 aa)
	fhuB	Iron(3+)-hydroxamate import system permease protein fhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (665 aa)
	mntB_3	ABC 3 transport family protein. (283 aa)
	modF	ABC transporter family protein. (493 aa)
	opuBC	Substrate binding domain of ABC-type glycine betaine transport system family protein. (310 aa)
	proV-2	ABC transporter family protein. (314 aa)
	znuB	High-affinity zinc uptake system membrane protein znuB. (261 aa)
	znuC	ABC transporter family protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (252 aa)
	btuD	ABC transporter family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. (252 aa)
	CH64_740	fecCD transport family protein. (335 aa)
	ecfA1	ABC transporter family protein. (296 aa)
	mntB_2	ABC 3 transport family protein. (294 aa)
	mntB_1	ABC 3 transport family protein. (297 aa)
	cbiO	Cobalt ABC transporter, ATP-binding family protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (271 aa)
	cydD	cydD: thiol reductant ABC exporter, CydD subunit. (588 aa)
	cydC	cydC: thiol reductant ABC exporter, CydC subunit. (574 aa)
	potH	Putrescine transport system permease protein PotH. (321 aa)
	potG	Polyamine ABC transporter, ATP-binding family protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (377 aa)

Your Current Organism:

Yersinia rohdei

NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CH64_2832	malF	CH64_2832	CH64_2286	Bacterial extracellular solute-binding family protein.	Binding--dependent transport system inner membrane component family protein.	0.843
CH64_2832	malK	CH64_2832	CH64_2283	Bacterial extracellular solute-binding family protein.	Maltose/maltodextrin import ATP-binding protein MalK; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.	0.827
CH64_2832	ugpA_1	CH64_2832	CH64_3083	Bacterial extracellular solute-binding family protein.	Binding--dependent transport system inner membrane component family protein.	0.931
CH64_2832	ugpA_2	CH64_2832	CH64_2833	Bacterial extracellular solute-binding family protein.	Binding--dependent transport system inner membrane component family protein.	0.998
CH64_2832	ugpC_1	CH64_2832	CH64_778	Bacterial extracellular solute-binding family protein.	ABC transporter family protein; Belongs to the ABC transporter superfamily.	0.842
CH64_2832	ugpC_2	CH64_2832	CH64_3085	Bacterial extracellular solute-binding family protein.	ABC transporter family protein; Belongs to the ABC transporter superfamily.	0.848
CH64_2832	ugpC_3	CH64_2832	CH64_2835	Bacterial extracellular solute-binding family protein.	ABC transporter family protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.987
CH64_2832	ugpE	CH64_2832	CH64_2834	Bacterial extracellular solute-binding family protein.	Binding--dependent transport system inner membrane component family protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.998
CH64_2832	ycjO	CH64_2832	CH64_776	Bacterial extracellular solute-binding family protein.	Binding--dependent transport system inner membrane component family protein.	0.915
CH64_2832	ycjP	CH64_2832	CH64_3084	Bacterial extracellular solute-binding family protein.	Binding--dependent transport system inner membrane component family protein.	0.940
CH64_740	btuD	CH64_740	CH64_738	fecCD transport family protein.	ABC transporter family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	0.999
btuD	CH64_740	CH64_738	CH64_740	ABC transporter family protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.	fecCD transport family protein.	0.999
cbiM	cbiN	CH64_97	CH64_98	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.996
cbiM	cbiO	CH64_97	CH64_100	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	Cobalt ABC transporter, ATP-binding family protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.997
cbiM	cbiQ	CH64_97	CH64_99	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	cbiQ_TIGR: cobalt ABC transporter, permease protein CbiQ.	0.999
cbiN	cbiM	CH64_98	CH64_97	Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.996
cbiN	cbiO	CH64_98	CH64_100	Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	Cobalt ABC transporter, ATP-binding family protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.995
cbiN	cbiQ	CH64_98	CH64_99	Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	cbiQ_TIGR: cobalt ABC transporter, permease protein CbiQ.	0.998
cbiO	cbiM	CH64_100	CH64_97	Cobalt ABC transporter, ATP-binding family protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.997
cbiO	cbiN	CH64_100	CH64_98	Cobalt ABC transporter, ATP-binding family protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.	0.995