STRINGSTRING
CH64_2631 CH64_2631 gmr gmr dcuS dcuS dhaR dhaR phoR phoR bdlA bdlA dosP dosP tyrR tyrR cph2_2 cph2_2 cph2_1 cph2_1 aer aer pleD pleD CH64_1429 CH64_1429 dpiB dpiB ydaM_2 ydaM_2 cph2_3 cph2_3 arcB arcB glnL glnL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CH64_2631Bacterial regulatory s, luxR family protein. (228 aa)
gmrGGDEF: diguanylate cyclase domain protein. (664 aa)
dcuSPAS fold family protein. (563 aa)
dhaRPAS fold family protein. (639 aa)
phoRphoR_proteo: phosphate regulon sensor kinase PhoR. (438 aa)
bdlASensory box protein. (434 aa)
dosPGGDEF: diguanylate cyclase domain protein. (863 aa)
tyrRTranscriptional regulatory protein tyrR. (525 aa)
cph2_2GGDEF: diguanylate cyclase domain protein. (569 aa)
cph2_1GGDEF: diguanylate cyclase domain protein. (469 aa)
aerSensory box protein. (519 aa)
pleDGGDEF: diguanylate cyclase domain protein. (335 aa)
CH64_1429GGDEF: diguanylate cyclase domain protein. (1119 aa)
dpiBSensor histidine kinase DpiB. (534 aa)
ydaM_2Putative diguanylate cyclase YdaM. (415 aa)
cph2_3GGDEF: diguanylate cyclase domain protein. (853 aa)
arcBSensory box protein. (778 aa)
glnLNitrogen regulation protein NR. (349 aa)
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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