STRINGSTRING
arcA_2 arcA_2 barA barA lytT lytT phoB phoB evgA-2 evgA-2 kdpE kdpE nreC nreC uvrY uvrY cpxR cpxR ntrC ntrC fixJ_2 fixJ_2 uhpA uhpA ompR ompR arcB arcB hnr hnr narP narP phoP phoP fixJ_1 fixJ_1 rstA rstA basR_2 basR_2 dcuR dcuR evgA evgA evgS evgS cheY cheY cheB cheB basR_1 basR_1 bvgA_2 bvgA_2 dpiA dpiA uhpA_2 uhpA_2 bvgA_1 bvgA_1 qseF qseF bvgS bvgS baeR baeR narL narL ompR_2 ompR_2 ypdB ypdB rcsC_1 rcsC_1 rcsB rcsB cheV cheV torS torS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
arcA_2Hypothetical protein; Transcriptional regulatory, C terminal family protein. (238 aa)
barAHAMP domain protein. (920 aa)
lytTResponse regulator. (238 aa)
phoBphoB: phosphate regulon transcriptional regulatory protein PhoB. (229 aa)
evgA-2Positive transcription regulator evgA. (204 aa)
kdpEKDP operon transcriptional regulatory protein kdpE. (229 aa)
nreCBacterial regulatory s, luxR family protein. (210 aa)
uvrYResponse regulator. (218 aa)
cpxRTranscriptional regulatory protein CpxR. (232 aa)
ntrCNitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (470 aa)
fixJ_2Bacterial regulatory s, luxR family protein. (205 aa)
uhpATranscriptional regulatory protein uhpA. (196 aa)
ompRTranscriptional regulatory protein ompR. (239 aa)
arcBSensory box protein. (778 aa)
hnrProtein hnr; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. (338 aa)
narPBacterial regulatory s, luxR family protein. (216 aa)
phoPTranscriptional regulatory protein phoP. (223 aa)
fixJ_1Bacterial regulatory s, luxR family protein. (194 aa)
rstAResponse regulator. (242 aa)
basR_2Hypothetical protein; Transcriptional regulatory, C terminal family protein. (219 aa)
dcuRTranscriptional regulatory protein dcuR. (228 aa)
evgAPositive transcription regulator evgA. (204 aa)
evgSSensor protein evgS. (1207 aa)
cheYChemotaxis protein CheY. (129 aa)
cheBcheB methylesterase family protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa)
basR_1Hypothetical protein; Transcriptional regulatory, C terminal family protein. (224 aa)
bvgA_2Response regulator. (140 aa)
dpiATranscriptional regulatory protein DpiA. (228 aa)
uhpA_2Bacterial regulatory s, luxR family protein. (209 aa)
bvgA_1Bacterial regulatory s, luxR family protein. (210 aa)
qseFAAA domain family protein. (445 aa)
bvgSHpt domain protein. (1284 aa)
baeRResponse regulator. (239 aa)
narLBacterial regulatory s, luxR family protein. (209 aa)
ompR_2Response regulator. (227 aa)
ypdBResponse regulator. (246 aa)
rcsC_1rcsC Alpha-Beta-Loop family protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (926 aa)
rcsBrcsB protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. (215 aa)
cheVResponse regulator. (324 aa)
torSHpt domain protein. (927 aa)
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
Server load: low (18%) [HD]
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