STRINGSTRING
sdcS sdcS citT citT ybhI ybhI arsB arsB gntM gntM gntP gntP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sdcSCitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)
citTCitrate:succinate antiporter; Involved in the transport of citrate into the cell along with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
ybhI2-oxoglutarate translocator; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
arsBArsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. (429 aa)
gntMGluconate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
gntPGluconate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
Your Current Organism:
Yersinia ruckeri
NCBI taxonomy Id: 29486
Other names: ATCC 29473, CCM 6093, CCUG 14190, CDC 2396-61, CIP 82.80, DSM 18506, JCM 15110, JCM 2429, NCIB 2194, NCIMB 2194, NCTC 12986, Y. ruckeri
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