(5 nodes) Alpha amylase, catalytic domain, and Alpha-amylase domain network (Aeromonas salmonicida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GCA_000820065_01023	Unannotated protein. (564 aa)
	glgX	Unannotated protein; Belongs to the glycosyl hydrolase 13 family. (713 aa)
	glgB	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (725 aa)
	malQ	Unannotated protein. (729 aa)
	malS	Unannotated protein. (742 aa)

Your Current Organism:

Aeromonas salmonicida

NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GCA_000820065_01023	glgB	GCA_000820065_01023	GCA_000820065_01726	Unannotated protein.	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.996
GCA_000820065_01023	glgX	GCA_000820065_01023	GCA_000820065_01725	Unannotated protein.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.939
GCA_000820065_01023	malQ	GCA_000820065_01023	GCA_000820065_01727	Unannotated protein.	Unannotated protein.	0.998
GCA_000820065_01023	malS	GCA_000820065_01023	GCA_000820065_03503	Unannotated protein.	Unannotated protein.	0.992
glgB	GCA_000820065_01023	GCA_000820065_01726	GCA_000820065_01023	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein.	0.996
glgB	glgX	GCA_000820065_01726	GCA_000820065_01725	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.999
glgB	malQ	GCA_000820065_01726	GCA_000820065_01727	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein.	0.999
glgB	malS	GCA_000820065_01726	GCA_000820065_03503	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein.	0.969
glgX	GCA_000820065_01023	GCA_000820065_01725	GCA_000820065_01023	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	Unannotated protein.	0.939
glgX	glgB	GCA_000820065_01725	GCA_000820065_01726	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.999
glgX	malQ	GCA_000820065_01725	GCA_000820065_01727	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	Unannotated protein.	0.999
glgX	malS	GCA_000820065_01725	GCA_000820065_03503	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	Unannotated protein.	0.977
malQ	GCA_000820065_01023	GCA_000820065_01727	GCA_000820065_01023	Unannotated protein.	Unannotated protein.	0.998
malQ	glgB	GCA_000820065_01727	GCA_000820065_01726	Unannotated protein.	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.999
malQ	glgX	GCA_000820065_01727	GCA_000820065_01725	Unannotated protein.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.999
malQ	malS	GCA_000820065_01727	GCA_000820065_03503	Unannotated protein.	Unannotated protein.	0.964
malS	GCA_000820065_01023	GCA_000820065_03503	GCA_000820065_01023	Unannotated protein.	Unannotated protein.	0.992
malS	glgB	GCA_000820065_03503	GCA_000820065_01726	Unannotated protein.	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.969
malS	glgX	GCA_000820065_03503	GCA_000820065_01725	Unannotated protein.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.977
malS	malQ	GCA_000820065_03503	GCA_000820065_01727	Unannotated protein.	Unannotated protein.	0.964