17 items (Aeromonas salmonicida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A4SPH4_AERS4	Unannotated protein. (698 aa)
	A4SH64_AERS4	Unannotated protein. (655 aa)
	A4SMQ3_AERS4	Unannotated protein. (1319 aa)
	A4SRC6_AERS4	Unannotated protein. (903 aa)
	A4SJM8_AERS4	Unannotated protein. (816 aa)
	GCA_000820065_01423	Unannotated protein. (963 aa)
	A4SN64_AERS4	Unannotated protein. (937 aa)
	A4SRG3_AERS4	Unannotated protein. (547 aa)
	A4SQ10_AERS4	Unannotated protein. (830 aa)
	cheV	Unannotated protein. (314 aa)
	A4SJC3_AERS4	Unannotated protein. (657 aa)
	A4SSK4_AERS4	Unannotated protein. (327 aa)
	A4SIB2_AERS4	Unannotated protein. (337 aa)
	A4SQC1_AERS4	Unannotated protein. (1131 aa)
	A4SQU0_AERS4	Unannotated protein. (1142 aa)
	A4SR40_AERS4	Unannotated protein. (770 aa)
	A4SI79_AERS4	Unannotated protein. (318 aa)

Your Current Organism:

Aeromonas salmonicida

NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4SH64_AERS4	A4SI79_AERS4	GCA_000820065_00530	GCA_000820065_04419	Unannotated protein.	Unannotated protein.	0.939
A4SH64_AERS4	A4SIB2_AERS4	GCA_000820065_00530	GCA_000820065_02921	Unannotated protein.	Unannotated protein.	0.971
A4SH64_AERS4	A4SJC3_AERS4	GCA_000820065_00530	GCA_000820065_02328	Unannotated protein.	Unannotated protein.	0.917
A4SH64_AERS4	A4SJM8_AERS4	GCA_000820065_00530	GCA_000820065_01216	Unannotated protein.	Unannotated protein.	0.861
A4SH64_AERS4	A4SMQ3_AERS4	GCA_000820065_00530	GCA_000820065_00719	Unannotated protein.	Unannotated protein.	0.998
A4SH64_AERS4	A4SN64_AERS4	GCA_000820065_00530	GCA_000820065_01644	Unannotated protein.	Unannotated protein.	0.995
A4SH64_AERS4	A4SPH4_AERS4	GCA_000820065_00530	GCA_000820065_00033	Unannotated protein.	Unannotated protein.	0.983
A4SH64_AERS4	A4SQ10_AERS4	GCA_000820065_00530	GCA_000820065_02250	Unannotated protein.	Unannotated protein.	0.947
A4SH64_AERS4	A4SQC1_AERS4	GCA_000820065_00530	GCA_000820065_03023	Unannotated protein.	Unannotated protein.	0.992
A4SH64_AERS4	A4SQU0_AERS4	GCA_000820065_00530	GCA_000820065_03661	Unannotated protein.	Unannotated protein.	0.991
A4SH64_AERS4	A4SR40_AERS4	GCA_000820065_00530	GCA_000820065_03782	Unannotated protein.	Unannotated protein.	0.999
A4SH64_AERS4	A4SRC6_AERS4	GCA_000820065_00530	GCA_000820065_01042	Unannotated protein.	Unannotated protein.	0.997
A4SH64_AERS4	A4SRG3_AERS4	GCA_000820065_00530	GCA_000820065_02062	Unannotated protein.	Unannotated protein.	0.768
A4SH64_AERS4	A4SSK4_AERS4	GCA_000820065_00530	GCA_000820065_02722	Unannotated protein.	Unannotated protein.	0.996
A4SH64_AERS4	GCA_000820065_01423	GCA_000820065_00530	GCA_000820065_01423	Unannotated protein.	Unannotated protein.	0.998
A4SH64_AERS4	cheV	GCA_000820065_00530	GCA_000820065_02302	Unannotated protein.	Unannotated protein.	0.989
A4SI79_AERS4	A4SH64_AERS4	GCA_000820065_04419	GCA_000820065_00530	Unannotated protein.	Unannotated protein.	0.939
A4SI79_AERS4	A4SIB2_AERS4	GCA_000820065_04419	GCA_000820065_02921	Unannotated protein.	Unannotated protein.	0.900
A4SI79_AERS4	A4SJC3_AERS4	GCA_000820065_04419	GCA_000820065_02328	Unannotated protein.	Unannotated protein.	0.995
A4SI79_AERS4	A4SJM8_AERS4	GCA_000820065_04419	GCA_000820065_01216	Unannotated protein.	Unannotated protein.	0.992