STRINGSTRING
A4SJJ9_AERS4 A4SJJ9_AERS4 A4SLE3_AERS4 A4SLE3_AERS4 rpiA rpiA fadJ fadJ A4SN07_AERS4 A4SN07_AERS4 gyrB gyrB rluC rluC hisA hisA truA truA A4SNS9_AERS4 A4SNS9_AERS4 maiA maiA A4SNS3_AERS4 A4SNS3_AERS4 murI murI purE purE parE parE parC parC rluA rluA A4SKD2_AERS4 A4SKD2_AERS4 truD truD nagB nagB pgm pgm A4SQ54_AERS4 A4SQ54_AERS4 truB truB tpiA-2 tpiA-2 glmM glmM galM galM galE galE rluD rluD topB topB A4SRJ8_AERS4 A4SRJ8_AERS4 araA araA galE-2 galE-2 hemL hemL A4SJ40_AERS4 A4SJ40_AERS4 fkpB fkpB A4SIT4_AERS4 A4SIT4_AERS4 A4SIM9_AERS4 A4SIM9_AERS4 A4SKX4_AERS4 A4SKX4_AERS4 rpe rpe A4SLG4_AERS4 A4SLG4_AERS4 alr2 alr2 manA manA tpiA tpiA deoB deoB tig tig ppiD ppiD A4SM68_AERS4 A4SM68_AERS4 fadB fadB topA topA alr alr entC entC ppiB ppiB rluE rluE A4SHX2_AERS4 A4SHX2_AERS4 gmhA-2 gmhA-2 A4ST53_AERS4 A4ST53_AERS4 purE-2 purE-2 gpmI gpmI truC truC ppiA ppiA galE-3 galE-3 A4SQP1_AERS4 A4SQP1_AERS4 A4SQP8_AERS4 A4SQP8_AERS4 pheA pheA A4SQR6_AERS4 A4SQR6_AERS4 alr-2 alr-2 fkpA fkpA slyD slyD A4SQZ6_AERS4 A4SQZ6_AERS4 surA surA apaG apaG GCA_000820065_03766 GCA_000820065_03766 GCA_000820065_03767 GCA_000820065_03767 wecB wecB fabA fabA rbsD rbsD gyrA gyrA A4SL23_AERS4 A4SL23_AERS4 rsuA rsuA rluB rluB trpC trpC hldD hldD A4SMF7_AERS4 A4SMF7_AERS4 menF menF dapF dapF groL groL rluA-2 rluA-2 pgi pgi ppiC ppiC gmhA gmhA rluF rluF tyrA tyrA queA queA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A4SJJ9_AERS4Unannotated protein. (268 aa)
A4SLE3_AERS4Unannotated protein. (159 aa)
rpiAUnannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (217 aa)
fadJUnannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (717 aa)
A4SN07_AERS4Unannotated protein. (301 aa)
gyrBUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (804 aa)
rluCUnannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (327 aa)
hisAUnannotated protein. (248 aa)
truAUnannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (269 aa)
A4SNS9_AERS4Unannotated protein. (171 aa)
maiAUnannotated protein. (195 aa)
A4SNS3_AERS4Unannotated protein. (166 aa)
murIUnannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis. (263 aa)
purEUnannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (164 aa)
parEUnannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (631 aa)
parCUnannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (775 aa)
rluAUnannotated protein. (243 aa)
A4SKD2_AERS4Unannotated protein. (203 aa)
truDUnannotated protein; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (352 aa)
nagBUnannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (266 aa)
pgmUnannotated protein. (554 aa)
A4SQ54_AERS4Unannotated protein. (156 aa)
truBUnannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (319 aa)
tpiA-2Unannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (254 aa)
glmMUnannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (444 aa)
galMUnannotated protein; Converts alpha-aldose to the beta-anomer. (326 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)
rluDUnannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (326 aa)
topBUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (656 aa)
A4SRJ8_AERS4Unannotated protein. (239 aa)
araAUnannotated protein; Catalyzes the conversion of L-arabinose to L-ribulose. (499 aa)
galE-2Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)
hemLUnannotated protein. (428 aa)
A4SJ40_AERS4Unannotated protein; Belongs to the glucose-6-phosphate 1-epimerase family. (288 aa)
fkpBUnannotated protein. (150 aa)
A4SIT4_AERS4Unannotated protein. (187 aa)
A4SIM9_AERS4Unannotated protein. (130 aa)
A4SKX4_AERS4Unannotated protein. (318 aa)
rpeUnannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. (224 aa)
A4SLG4_AERS4Unannotated protein. (284 aa)
alr2Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (408 aa)
manAUnannotated protein; Belongs to the mannose-6-phosphate isomerase type 1 family. (399 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
deoBUnannotated protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (402 aa)
tigUnannotated protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (436 aa)
ppiDUnannotated protein. (637 aa)
A4SM68_AERS4Unannotated protein. (370 aa)
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (715 aa)
topAUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (873 aa)
alrUnannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (367 aa)
entCUnannotated protein. (422 aa)
ppiBUnannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
rluEUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (321 aa)
A4SHX2_AERS4Unannotated protein. (331 aa)
gmhA-2Unannotated protein. (196 aa)
A4ST53_AERS4Unannotated protein. (185 aa)
purE-2Unannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (167 aa)
gpmIUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa)
truCUnannotated protein. (246 aa)
ppiAUnannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (183 aa)
galE-3Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (341 aa)
A4SQP1_AERS4Unannotated protein. (180 aa)
A4SQP8_AERS4Unannotated protein. (142 aa)
pheAUnannotated protein. (390 aa)
A4SQR6_AERS4Unannotated protein. (110 aa)
alr-2Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (357 aa)
fkpAUnannotated protein. (268 aa)
slyDUnannotated protein. (197 aa)
A4SQZ6_AERS4Unannotated protein. (336 aa)
surAUnannotated protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (432 aa)
apaGUnannotated protein. (120 aa)
GCA_000820065_03766Unannotated protein. (379 aa)
GCA_000820065_03767Unannotated protein. (123 aa)
wecBUnannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (370 aa)
fabAUnannotated protein; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (186 aa)
rbsDUnannotated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (139 aa)
gyrAUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (934 aa)
A4SL23_AERS4Unannotated protein. (289 aa)
rsuAUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (230 aa)
rluBUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (307 aa)
trpCUnannotated protein; Belongs to the TrpC family. (498 aa)
hldDUnannotated protein; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (319 aa)
A4SMF7_AERS4Unannotated protein. (321 aa)
menFUnannotated protein; Catalyzes the conversion of chorismate to isochorismate. (451 aa)
dapFUnannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (276 aa)
groLUnannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (544 aa)
rluA-2Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (218 aa)
pgiUnannotated protein; Belongs to the GPI family. (549 aa)
ppiCUnannotated protein. (92 aa)
gmhAUnannotated protein; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (192 aa)
rluFUnannotated protein; Belongs to the pseudouridine synthase RsuA family. (344 aa)
tyrAUnannotated protein. (375 aa)
queAUnannotated protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (355 aa)
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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