STRINGSTRING
A4SQC6_AERS4 A4SQC6_AERS4 oppD oppD oppF oppF A4SQC5_AERS4 A4SQC5_AERS4 sapD sapD dppD dppD appF appF appD appD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A4SQC6_AERS4Unannotated protein; Belongs to the ABC transporter superfamily. (326 aa)
oppDUnannotated protein; Belongs to the ABC transporter superfamily. (328 aa)
oppFUnannotated protein; Belongs to the ABC transporter superfamily. (331 aa)
A4SQC5_AERS4Unannotated protein; Belongs to the ABC transporter superfamily. (339 aa)
sapDUnannotated protein; Belongs to the ABC transporter superfamily. (332 aa)
dppDUnannotated protein; Belongs to the ABC transporter superfamily. (574 aa)
appFUnannotated protein; Belongs to the ABC transporter superfamily. (335 aa)
appDUnannotated protein; Belongs to the ABC transporter superfamily. (352 aa)
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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