(9 nodes) Immunoglobulin E-set network (Aeromonas salmonicida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	chb	Unannotated protein. (876 aa)
	malZ	Unannotated protein; Belongs to the glycosyl hydrolase 13 family. (609 aa)
	glgX	Unannotated protein; Belongs to the glycosyl hydrolase 13 family. (713 aa)
	glgB	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (725 aa)
	A4SIW1_AERS4	Unannotated protein. (107 aa)
	pulA	Unannotated protein; Belongs to the glycosyl hydrolase 13 family. (1361 aa)
	A4SIP8_AERS4	Unannotated protein. (474 aa)
	A4SPN2_AERS4	Unannotated protein. (781 aa)
	A4SQC7_AERS4	Unannotated protein. (579 aa)

Your Current Organism:

Aeromonas salmonicida

NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4SIP8_AERS4	A4SPN2_AERS4	GCA_000820065_01895	GCA_000820065_02213	Unannotated protein.	Unannotated protein.	0.694
A4SIP8_AERS4	A4SQC7_AERS4	GCA_000820065_01895	GCA_000820065_03029	Unannotated protein.	Unannotated protein.	0.608
A4SIP8_AERS4	chb	GCA_000820065_01895	GCA_000820065_01080	Unannotated protein.	Unannotated protein.	0.723
A4SIW1_AERS4	glgB	GCA_000820065_01823	GCA_000820065_01726	Unannotated protein.	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.416
A4SIW1_AERS4	glgX	GCA_000820065_01823	GCA_000820065_01725	Unannotated protein.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.849
A4SIW1_AERS4	malZ	GCA_000820065_01823	GCA_000820065_01237	Unannotated protein.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.540
A4SIW1_AERS4	pulA	GCA_000820065_01823	GCA_000820065_01867	Unannotated protein.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.849
A4SPN2_AERS4	A4SIP8_AERS4	GCA_000820065_02213	GCA_000820065_01895	Unannotated protein.	Unannotated protein.	0.694
A4SPN2_AERS4	A4SQC7_AERS4	GCA_000820065_02213	GCA_000820065_03029	Unannotated protein.	Unannotated protein.	0.537
A4SPN2_AERS4	chb	GCA_000820065_02213	GCA_000820065_01080	Unannotated protein.	Unannotated protein.	0.592
A4SQC7_AERS4	A4SIP8_AERS4	GCA_000820065_03029	GCA_000820065_01895	Unannotated protein.	Unannotated protein.	0.608
A4SQC7_AERS4	A4SPN2_AERS4	GCA_000820065_03029	GCA_000820065_02213	Unannotated protein.	Unannotated protein.	0.537
A4SQC7_AERS4	chb	GCA_000820065_03029	GCA_000820065_01080	Unannotated protein.	Unannotated protein.	0.602
chb	A4SIP8_AERS4	GCA_000820065_01080	GCA_000820065_01895	Unannotated protein.	Unannotated protein.	0.723
chb	A4SPN2_AERS4	GCA_000820065_01080	GCA_000820065_02213	Unannotated protein.	Unannotated protein.	0.592
chb	A4SQC7_AERS4	GCA_000820065_01080	GCA_000820065_03029	Unannotated protein.	Unannotated protein.	0.602
glgB	A4SIW1_AERS4	GCA_000820065_01726	GCA_000820065_01823	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein.	0.416
glgB	glgX	GCA_000820065_01726	GCA_000820065_01725	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.999
glgB	malZ	GCA_000820065_01726	GCA_000820065_01237	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.741
glgB	pulA	GCA_000820065_01726	GCA_000820065_01867	Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Unannotated protein; Belongs to the glycosyl hydrolase 13 family.	0.991