STRINGSTRING
GCA_000820065_00235 GCA_000820065_00235 A4SI91_AERS4 A4SI91_AERS4 secA secA mdtH mdtH A4SR92_AERS4 A4SR92_AERS4 A4SRY6_AERS4 A4SRY6_AERS4 katG katG sodA sodA GCA_000820065_04046 GCA_000820065_04046 GCA_000820065_04040 GCA_000820065_04040 GCA_000820065_04039 GCA_000820065_04039 msbA msbA bcp bcp A4SR11_AERS4 A4SR11_AERS4 ampG ampG rpoA rpoA secY secY A4SHW9_AERS4 A4SHW9_AERS4 sodB sodB rpoC rpoC rpoB rpoB secE secE GCA_000820065_03152 GCA_000820065_03152 A4SM05_AERS4 A4SM05_AERS4 dppC-2 dppC-2 dppB-2 dppB-2 dppA-2 dppA-2 A4SQC4_AERS4 A4SQC4_AERS4 A4SQC3_AERS4 A4SQC3_AERS4 A4SQC2_AERS4 A4SQC2_AERS4 A4SLS0_AERS4 A4SLS0_AERS4 bfr bfr trxA trxA A4SM26_AERS4 A4SM26_AERS4 GCA_000820065_02719 GCA_000820065_02719 A4SSQ7_AERS4 A4SSQ7_AERS4 adhC adhC A4SRP7_AERS4 A4SRP7_AERS4 A4SJG2_AERS4 A4SJG2_AERS4 appA appA GCA_000820065_02359 GCA_000820065_02359 GCA_000820065_02358 GCA_000820065_02358 A4SJB6_AERS4 A4SJB6_AERS4 A4SPY7_AERS4 A4SPY7_AERS4 A4SQ35_AERS4 A4SQ35_AERS4 ahpC-2 ahpC-2 A4SLN1_AERS4 A4SLN1_AERS4 secF-2 secF-2 secD-2 secD-2 oppC oppC oppB oppB A4SLI3_AERS4 A4SLI3_AERS4 A4SK38_AERS4 A4SK38_AERS4 A4SK40_AERS4 A4SK40_AERS4 tpx tpx A4SJ16_AERS4 A4SJ16_AERS4 mdlB mdlB GCA_000820065_01645 GCA_000820065_01645 trxC trxC sucB sucB sapA sapA lrp lrp trxB trxB tuf1 tuf1 A4SRL3_AERS4 A4SRL3_AERS4 A4SRL1_AERS4 A4SRL1_AERS4 asnC asnC A4SHM0_AERS4 A4SHM0_AERS4 ribD ribD dppA dppA dppB dppB dppC dppC secG secG A4SJS0_AERS4 A4SJS0_AERS4 GCA_000820065_01167 GCA_000820065_01167 A4SKH9_AERS4 A4SKH9_AERS4 A4SKC7_AERS4 A4SKC7_AERS4 A4SK80_AERS4 A4SK80_AERS4 mobC mobC flpL flpL GCA_000820065_00653 GCA_000820065_00653 GCA_000820065_00652 GCA_000820065_00652 A4STR6_AERS4 A4STR6_AERS4 A4STR7_AERS4 A4STR7_AERS4 GCA_000820065_00539 GCA_000820065_00539 GCA_000820065_00538 GCA_000820065_00538 rpoZ rpoZ ftn ftn A4SN01_AERS4 A4SN01_AERS4 GCA_000820065_00323 GCA_000820065_00323 GCA_000820065_00322 GCA_000820065_00322 msrA-2 msrA-2 ndk ndk secF secF secD secD ahpC ahpC A4SP31_AERS4 A4SP31_AERS4 A4SP43_AERS4 A4SP43_AERS4 A4SP45_AERS4 A4SP45_AERS4 A4SP46_AERS4 A4SP46_AERS4 GCA_000820065_00236 GCA_000820065_00236 GCA_000820065_00145 GCA_000820065_00145 GCA_000820065_00144 GCA_000820065_00144 A4SPB5_AERS4 A4SPB5_AERS4 msrA msrA A4SPK2_AERS4 A4SPK2_AERS4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000820065_00235Unannotated protein. (166 aa)
A4SI91_AERS4Unannotated protein; Belongs to the major facilitator superfamily. (462 aa)
secAUnannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (906 aa)
mdtHUnannotated protein. (397 aa)
A4SR92_AERS4Unannotated protein. (387 aa)
A4SRY6_AERS4Unannotated protein. (156 aa)
katGUnannotated protein; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (699 aa)
sodAUnannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (204 aa)
GCA_000820065_04046Unannotated protein. (354 aa)
GCA_000820065_04040Unannotated protein. (468 aa)
GCA_000820065_04039Unannotated protein. (152 aa)
msbAUnannotated protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (589 aa)
bcpUnannotated protein. (154 aa)
A4SR11_AERS4Unannotated protein. (329 aa)
ampGUnannotated protein. (459 aa)
rpoAUnannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa)
secYUnannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (442 aa)
A4SHW9_AERS4Unannotated protein. (163 aa)
sodBUnannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (194 aa)
rpoCUnannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1434 aa)
rpoBUnannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1342 aa)
secEUnannotated protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (123 aa)
GCA_000820065_03152Unannotated protein. (45 aa)
A4SM05_AERS4Unannotated protein. (412 aa)
dppC-2Unannotated protein. (271 aa)
dppB-2Unannotated protein. (334 aa)
dppA-2Unannotated protein. (535 aa)
A4SQC4_AERS4Unannotated protein. (302 aa)
A4SQC3_AERS4Unannotated protein. (324 aa)
A4SQC2_AERS4Unannotated protein. (561 aa)
A4SLS0_AERS4Unannotated protein. (402 aa)
bfrUnannotated protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (159 aa)
trxAUnannotated protein; Belongs to the thioredoxin family. (108 aa)
A4SM26_AERS4Unannotated protein. (457 aa)
GCA_000820065_02719Unannotated protein. (166 aa)
A4SSQ7_AERS4Unannotated protein; Belongs to the major facilitator superfamily. (517 aa)
adhCUnannotated protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (375 aa)
A4SRP7_AERS4Unannotated protein. (410 aa)
A4SJG2_AERS4Unannotated protein. (363 aa)
appAUnannotated protein. (605 aa)
GCA_000820065_02359Unannotated protein. (292 aa)
GCA_000820065_02358Unannotated protein. (60 aa)
A4SJB6_AERS4Unannotated protein. (1186 aa)
A4SPY7_AERS4Unannotated protein. (453 aa)
A4SQ35_AERS4Unannotated protein. (268 aa)
ahpC-2Unannotated protein. (200 aa)
A4SLN1_AERS4Unannotated protein. (630 aa)
secF-2Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (304 aa)
secD-2Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (600 aa)
oppCUnannotated protein. (303 aa)
oppBUnannotated protein. (306 aa)
A4SLI3_AERS4Unannotated protein. (459 aa)
A4SK38_AERS4Unannotated protein. (454 aa)
A4SK40_AERS4Unannotated protein. (384 aa)
tpxUnannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (166 aa)
A4SJ16_AERS4Unannotated protein. (150 aa)
mdlBUnannotated protein. (583 aa)
GCA_000820065_01645Unannotated protein. (299 aa)
trxCUnannotated protein. (142 aa)
sucBUnannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (394 aa)
sapAUnannotated protein. (533 aa)
lrpUnannotated protein. (163 aa)
trxBUnannotated protein. (361 aa)
tuf1Unannotated protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (45 aa)
A4SRL3_AERS4Unannotated protein. (158 aa)
A4SRL1_AERS4Unannotated protein. (412 aa)
asnCUnannotated protein. (153 aa)
A4SHM0_AERS4Unannotated protein. (464 aa)
ribDUnannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (369 aa)
dppAUnannotated protein. (518 aa)
dppBUnannotated protein. (324 aa)
dppCUnannotated protein. (313 aa)
secGUnannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (108 aa)
A4SJS0_AERS4Unannotated protein. (318 aa)
GCA_000820065_01167Unannotated protein. (85 aa)
A4SKH9_AERS4Unannotated protein. (282 aa)
A4SKC7_AERS4Unannotated protein. (324 aa)
A4SK80_AERS4Unannotated protein. (390 aa)
mobCUnannotated protein. (113 aa)
flpLUnannotated protein. (460 aa)
GCA_000820065_00653Unannotated protein. (479 aa)
GCA_000820065_00652Unannotated protein. (371 aa)
A4STR6_AERS4Unannotated protein. (589 aa)
A4STR7_AERS4Unannotated protein. (607 aa)
GCA_000820065_00539Unannotated protein. (95 aa)
GCA_000820065_00538Unannotated protein. (75 aa)
rpoZUnannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (91 aa)
ftnUnannotated protein; Iron-storage protein. (174 aa)
A4SN01_AERS4Unannotated protein. (409 aa)
GCA_000820065_00323Unannotated protein. (140 aa)
GCA_000820065_00322Unannotated protein. (252 aa)
msrA-2Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (210 aa)
ndkUnannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (142 aa)
secFUnannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (315 aa)
secDUnannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (617 aa)
ahpCUnannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (188 aa)
A4SP31_AERS4Unannotated protein. (408 aa)
A4SP43_AERS4Unannotated protein. (399 aa)
A4SP45_AERS4Unannotated protein. (268 aa)
A4SP46_AERS4Unannotated protein. (320 aa)
GCA_000820065_00236Unannotated protein. (340 aa)
GCA_000820065_00145Unannotated protein. (424 aa)
GCA_000820065_00144Unannotated protein. (94 aa)
A4SPB5_AERS4Unannotated protein. (390 aa)
msrAUnannotated protein. (186 aa)
A4SPK2_AERS4Unannotated protein. (197 aa)
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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