37 items (Aeromonas salmonicida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gabT	Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (434 aa)
	GCA_000820065_00851	Unannotated protein. (105 aa)
	A4SPR0_AERS4	Unannotated protein. (427 aa)
	asnB	Unannotated protein. (554 aa)
	glmS	Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (610 aa)
	glnA	Unannotated protein; Belongs to the glutamine synthetase family. (452 aa)
	carB	Unannotated protein; Belongs to the CarB family. (1074 aa)
	gabD	Unannotated protein; Belongs to the aldehyde dehydrogenase family. (487 aa)
	gdhA	Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (448 aa)
	ald	Unannotated protein; Belongs to the AlaDH/PNT family. (302 aa)
	carA	Unannotated protein; Belongs to the CarA family. (383 aa)
	purF	Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (506 aa)
	A4SNH5_AERS4	Unannotated protein. (277 aa)
	GCA_000820065_01527	Unannotated protein. (194 aa)
	putA	Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1054 aa)
	argH	Unannotated protein. (461 aa)
	argG	Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (411 aa)
	nadB	Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate. (535 aa)
	gltD	Unannotated protein. (471 aa)
	gltB	Unannotated protein. (1485 aa)
	A4SLJ3_AERS4	Unannotated protein. (404 aa)
	glsA	Unannotated protein; Belongs to the glutaminase family. (306 aa)
	aspG	Unannotated protein. (335 aa)
	A4SSL0_AERS4	Unannotated protein. (277 aa)
	ansB	Unannotated protein; Belongs to the asparaginase 1 family. (352 aa)
	purA	Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (418 aa)
	purB	Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (456 aa)
	GCA_000820065_01487	Unannotated protein. (69 aa)
	A4SRJ8_AERS4	Unannotated protein. (239 aa)
	asnA	Unannotated protein. (330 aa)
	pyrB	Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (306 aa)
	pyrI	Unannotated protein; Involved in allosteric regulation of aspartate carbamoyltransferase. (154 aa)
	glnA-2	Unannotated protein. (469 aa)
	A4SJA0_AERS4	Unannotated protein. (511 aa)
	A4SME1_AERS4	Unannotated protein. (1613 aa)
	aspC	Unannotated protein. (396 aa)
	aspA	Unannotated protein. (480 aa)

Your Current Organism:

Aeromonas salmonicida

NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4SJA0_AERS4	A4SLJ3_AERS4	GCA_000820065_03831	GCA_000820065_02154	Unannotated protein.	Unannotated protein.	0.494
A4SJA0_AERS4	A4SME1_AERS4	GCA_000820065_03831	GCA_000820065_03868	Unannotated protein.	Unannotated protein.	0.933
A4SJA0_AERS4	A4SRJ8_AERS4	GCA_000820065_03831	GCA_000820065_01380	Unannotated protein.	Unannotated protein.	0.939
A4SJA0_AERS4	GCA_000820065_01527	GCA_000820065_03831	GCA_000820065_01527	Unannotated protein.	Unannotated protein.	0.494
A4SJA0_AERS4	ansB	GCA_000820065_03831	GCA_000820065_02931	Unannotated protein.	Unannotated protein; Belongs to the asparaginase 1 family.	0.938
A4SJA0_AERS4	argG	GCA_000820065_03831	GCA_000820065_01918	Unannotated protein.	Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.	0.937
A4SJA0_AERS4	asnA	GCA_000820065_03831	GCA_000820065_01322	Unannotated protein.	Unannotated protein.	0.932
A4SJA0_AERS4	asnB	GCA_000820065_03831	GCA_000820065_00606	Unannotated protein.	Unannotated protein.	0.934
A4SJA0_AERS4	aspA	GCA_000820065_03831	GCA_000820065_04364	Unannotated protein.	Unannotated protein.	0.933
A4SJA0_AERS4	aspC	GCA_000820065_03831	GCA_000820065_03965	Unannotated protein.	Unannotated protein.	0.937
A4SJA0_AERS4	aspG	GCA_000820065_03831	GCA_000820065_02422	Unannotated protein.	Unannotated protein.	0.578
A4SJA0_AERS4	carB	GCA_000820065_03831	GCA_000820065_00408	Unannotated protein.	Unannotated protein; Belongs to the CarB family.	0.553
A4SJA0_AERS4	gabT	GCA_000820065_03831	GCA_000820065_01147	Unannotated protein.	Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.974
A4SJA0_AERS4	gdhA	GCA_000820065_03831	GCA_000820065_00081	Unannotated protein.	Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.946
A4SJA0_AERS4	glmS	GCA_000820065_03831	GCA_000820065_00599	Unannotated protein.	Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.	0.427
A4SJA0_AERS4	glnA	GCA_000820065_03831	GCA_000820065_01245	Unannotated protein.	Unannotated protein; Belongs to the glutamine synthetase family.	0.939
A4SJA0_AERS4	glnA-2	GCA_000820065_03831	GCA_000820065_03431	Unannotated protein.	Unannotated protein.	0.939
A4SJA0_AERS4	glsA	GCA_000820065_03831	GCA_000820065_02313	Unannotated protein.	Unannotated protein; Belongs to the glutaminase family.	0.966
A4SJA0_AERS4	gltB	GCA_000820065_03831	GCA_000820065_02133	Unannotated protein.	Unannotated protein.	0.958
A4SJA0_AERS4	nadB	GCA_000820065_03831	GCA_000820065_02039	Unannotated protein.	Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.	0.934