STRINGSTRING
accC accC A4SHQ4_AERS4 A4SHQ4_AERS4 ackA ackA sucC sucC sucD sucD pflB pflB gldA gldA A4STE6_AERS4 A4STE6_AERS4 GCA_000820065_04473 GCA_000820065_04473 GCA_000820065_04472 GCA_000820065_04472 acnB acnB lpdA lpdA A4SRZ9_AERS4 A4SRZ9_AERS4 A4SMB2_AERS4 A4SMB2_AERS4 pta pta ackA-2 ackA-2 accA accA A4SIU4_AERS4 A4SIU4_AERS4 A4SJH5_AERS4 A4SJH5_AERS4 mmsA mmsA A4ST70_AERS4 A4ST70_AERS4 mmsA-2 mmsA-2 A4SM68_AERS4 A4SM68_AERS4 cgrD cgrD fadB fadB grcA grcA mccF mccF mgsA mgsA fadJ fadJ atoB atoB prpD prpD prpB prpB accD accD gabT gabT acsA acsA accB accB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
accCUnannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (446 aa)
A4SHQ4_AERS4Unannotated protein. (387 aa)
ackAUnannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)
sucCUnannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
sucDUnannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
pflBUnannotated protein. (760 aa)
gldAUnannotated protein. (372 aa)
A4STE6_AERS4Unannotated protein. (856 aa)
GCA_000820065_04473Unannotated protein. (149 aa)
GCA_000820065_04472Unannotated protein. (194 aa)
acnBUnannotated protein; Belongs to the aconitase/IPM isomerase family. (865 aa)
lpdAUnannotated protein. (475 aa)
A4SRZ9_AERS4Unannotated protein. (383 aa)
A4SMB2_AERS4Unannotated protein. (186 aa)
ptaUnannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (712 aa)
ackA-2Unannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
accAUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (316 aa)
A4SIU4_AERS4Unannotated protein. (301 aa)
A4SJH5_AERS4Unannotated protein. (456 aa)
mmsAUnannotated protein. (498 aa)
A4ST70_AERS4Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)
mmsA-2Unannotated protein. (503 aa)
A4SM68_AERS4Unannotated protein. (370 aa)
cgrDUnannotated protein. (360 aa)
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (715 aa)
grcAUnannotated protein; Acts as a radical domain for damaged PFL and possibly other radical proteins. (126 aa)
mccFUnannotated protein. (337 aa)
mgsAUnannotated protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (152 aa)
fadJUnannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (717 aa)
atoBUnannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (334 aa)
prpDUnannotated protein. (860 aa)
prpBUnannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (295 aa)
accDUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (287 aa)
gabTUnannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (434 aa)
acsAUnannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (648 aa)
accBUnannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (144 aa)
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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