STRINGSTRING
yajC yajC slt slt GCA_000820065_04537 GCA_000820065_04537 traN traN traD traD tapB tapB GCA_000820065_04410 GCA_000820065_04410 GCA_000820065_04409 GCA_000820065_04409 tapD tapD secA secA A4SI45_AERS4 A4SI45_AERS4 exeC exeC exeD exeD exeE exeE exeF exeF exeG exeG exeH exeH exeI exeI exeJ exeJ exeK exeK exeL exeL exeM exeM A4SSB3_AERS4 A4SSB3_AERS4 A4SJ86_AERS4 A4SJ86_AERS4 GCA_000820065_03729 GCA_000820065_03729 GCA_000820065_03728 GCA_000820065_03728 secY secY secB secB lptC lptC A4SL80_AERS4 A4SL80_AERS4 secE secE A4SM06_AERS4 A4SM06_AERS4 tolC-2 tolC-2 mltC mltC spsE spsE spsF spsF spsJ spsJ spsK spsK spsD spsD tatC tatC tatB tatB tatA-2 tatA-2 mshO mshO mshND mshND mshL mshL mshJ mshJ mshI1 mshI1 mshI mshI ftsY ftsY tatA tatA tppF tppF A4SUM7_AERS4 A4SUM7_AERS4 secF-2 secF-2 secD-2 secD-2 tapM tapM tapN tapN tapQ tapQ A4SSD9_AERS4 A4SSD9_AERS4 ffh ffh tppB tppB tppC tppC tppE tppE A4SN94_AERS4 A4SN94_AERS4 clpA clpA GCA_000820065_01468 GCA_000820065_01468 GCA_000820065_01467 GCA_000820065_01467 clpB2 clpB2 A4SNM9_AERS4 A4SNM9_AERS4 A4SNN1_AERS4 A4SNN1_AERS4 A4SNN2_AERS4 A4SNN2_AERS4 clpB clpB GCA_000820065_01189 GCA_000820065_01189 secG secG A4SKG9_AERS4 A4SKG9_AERS4 A4SUQ8_AERS4 A4SUQ8_AERS4 ftsB ftsB aopO aopO yidC yidC secF secF secD secD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yajCUnannotated protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (111 aa)
sltUnannotated protein. (620 aa)
GCA_000820065_04537Unannotated protein. (120 aa)
traNUnannotated protein. (535 aa)
traDUnannotated protein. (720 aa)
tapBUnannotated protein. (568 aa)
GCA_000820065_04410Unannotated protein. (342 aa)
GCA_000820065_04409Unannotated protein. (68 aa)
tapDUnannotated protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. Processes the TapA pilin precursor during membrane translocation (By similarity). (291 aa)
secAUnannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (906 aa)
A4SI45_AERS4Unannotated protein. (362 aa)
exeCUnannotated protein. (290 aa)
exeDUnannotated protein. (678 aa)
exeEUnannotated protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (501 aa)
exeFUnannotated protein. (406 aa)
exeGUnannotated protein. (143 aa)
exeHUnannotated protein. (187 aa)
exeIUnannotated protein. (119 aa)
exeJUnannotated protein. (215 aa)
exeKUnannotated protein. (322 aa)
exeLUnannotated protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (394 aa)
exeMUnannotated protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (163 aa)
A4SSB3_AERS4Unannotated protein. (537 aa)
A4SJ86_AERS4Unannotated protein. (452 aa)
GCA_000820065_03729Unannotated protein. (83 aa)
GCA_000820065_03728Unannotated protein. (204 aa)
secYUnannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (442 aa)
secBUnannotated protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (156 aa)
lptCUnannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family. (186 aa)
A4SL80_AERS4Unannotated protein. (537 aa)
secEUnannotated protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (123 aa)
A4SM06_AERS4Unannotated protein. (270 aa)
tolC-2Unannotated protein. (441 aa)
mltCUnannotated protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. (366 aa)
spsEUnannotated protein. (552 aa)
spsFUnannotated protein. (395 aa)
spsJUnannotated protein. (235 aa)
spsKUnannotated protein. (282 aa)
spsDUnannotated protein; Belongs to the bacterial secretin family. (719 aa)
tatCUnannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (251 aa)
tatBUnannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (148 aa)
tatA-2Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (81 aa)
mshOUnannotated protein. (309 aa)
mshNDUnannotated protein. (199 aa)
mshLUnannotated protein. (556 aa)
mshJUnannotated protein. (215 aa)
mshI1Unannotated protein. (197 aa)
mshIUnannotated protein. (287 aa)
ftsYUnannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (631 aa)
tatAUnannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (53 aa)
tppFUnannotated protein. (203 aa)
A4SUM7_AERS4Unannotated protein. (161 aa)
secF-2Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (304 aa)
secD-2Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (600 aa)
tapMUnannotated protein. (353 aa)
tapNUnannotated protein. (192 aa)
tapQUnannotated protein. (730 aa)
A4SSD9_AERS4Unannotated protein. (314 aa)
ffhUnannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belongs to t [...] (459 aa)
tppBUnannotated protein. (188 aa)
tppCUnannotated protein. (328 aa)
tppEUnannotated protein. (165 aa)
A4SN94_AERS4Unannotated protein. (120 aa)
clpAUnannotated protein; Belongs to the ClpA/ClpB family. (750 aa)
GCA_000820065_01468Unannotated protein. (246 aa)
GCA_000820065_01467Unannotated protein. (1403 aa)
clpB2Unannotated protein; Belongs to the ClpA/ClpB family. (880 aa)
A4SNM9_AERS4Unannotated protein. (259 aa)
A4SNN1_AERS4Unannotated protein. (171 aa)
A4SNN2_AERS4Unannotated protein. (407 aa)
clpBUnannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (857 aa)
GCA_000820065_01189Unannotated protein. (141 aa)
secGUnannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (108 aa)
A4SKG9_AERS4Unannotated protein. (257 aa)
A4SUQ8_AERS4Unannotated protein. (531 aa)
ftsBUnannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (105 aa)
aopOUnannotated protein. (553 aa)
yidCUnannotated protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (548 aa)
secFUnannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (315 aa)
secDUnannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (617 aa)
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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