STRINGSTRING
BF0219 BF0219 BF0820 BF0820 BF0822 BF0822 BF0972 BF0972 BF1434 BF1434 BF1474 BF1474 BF2258 BF2258 fabH fabH fabH-2 fabH-2 BF4118 BF4118
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
BF02193-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (420 aa)
BF0820Probable 3-oxoacyl-[acyl carrier protein] synthase; Similar to gp:AY280452_3 [Pseudomonas aeruginosa], percent identity 39 in 353 aa, BLASTP E(): 1e-67. (351 aa)
BF08223-oxoacyl-[acyl-carrier-protein] synthase; Similar to gp:AE011831_9 [ACP], percent identity 34 in 324 aa, BLASTP E(): 3e-50. (336 aa)
BF0972Enoyl-[acyl-carrier-protein] reductase; Similar to gp:AE016944_44 [acyl-carrier-protein], percent identity 91 in 285 aa, BLASTP E(): e-147. (285 aa)
BF14343-oxoacyl-[acyl-carrier-protein] reductase; Similar to gp:AP005958_17 [Bradyrhizobium japonicum USDA 110], percent identity 37 in 238 aa, BLASTP E(): 4e-36. (240 aa)
BF1474Dioxygenase; Similar to gp:AE016932_87 [Bacteroides thetaiotaomicron VPI-5482], percent identity 84 in 308 aa, BLASTP E(): e-147. (314 aa)
BF2258Malonyl CoA-acyl carrier protein transacylase; Similar to gp:AE016929_59 [Bacteroides thetaiotaomicron VPI-5482], percent identity 97 in 295 aa, BLASTP E(): e-163. (295 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (337 aa)
fabH-23-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (334 aa)
BF41183-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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