STRINGSTRING
BF0630 BF0630 BF0652 BF0652 BF0738 BF0738 BF1504 BF1504 BF1760 BF1760 BF2070 BF2070 BF2115 BF2115 BF2633 BF2633 BF3091 BF3091 BF3363 BF3363 BF3490 BF3490 BF3539 BF3539 BF3851 BF3851 BF4305 BF4305
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF0630Putative transcriptional regulator; Similar to pir:AD2129, percent identity 34 in 199 aa, BLASTP E(): 3e-24. (335 aa)
BF0652Putative transcriptional regulator; Similar to gp:AE016812_175 [Vibrio vulnificus CMCP6], percent identity 23 in 269 aa, BLASTP E(): 1e-15. (280 aa)
BF0738Conserved hypothetical protein; Similar to gp:AE016943_19 [Bacteroides thetaiotaomicron VPI-5482], percent identity 54 in 261 aa, BLASTP E(): 2e-78. (291 aa)
BF1504Transcriptional regulator; Similar to gp:AE016928_242 [Bacteroides thetaiotaomicron VPI-5482], percent identity 68 in 297 aa, BLASTP E(): e-117. (299 aa)
BF1760Transcriptional regulator; Similar to gp:AE016941_95 [Bacteroides thetaiotaomicron VPI-5482], percent identity 42 in 382 aa, BLASTP E(): 2e-90. (391 aa)
BF2070Putative transcriptional regulator; Similar to gp:RLU40388_2 [Rhizobium leguminosarum], percent identity 31 in 163 aa, BLASTP E(): 2e-16. (305 aa)
BF2115Putative AraC-type transcription regulator; Similar to gp:AE016943_19 [Bacteroides thetaiotaomicron VPI-5482], percent identity 37 in 257 aa, BLASTP E(): 5e-39. (290 aa)
BF2633Transcriptional regulator; Similar to gp:AE016928_72 [Bacteroides thetaiotaomicron VPI-5482], percent identity 56 in 296 aa, BLASTP E(): 2e-90. (320 aa)
BF3091Transcriptional regulator; Similar to gp:AE016934_49 [Bacteroides thetaiotaomicron VPI-5482], percent identity 30 in 245 aa, BLASTP E(): 5e-25. (276 aa)
BF3363Transcriptional regulator; Similar to gp:AE016934_201 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 284 aa, BLASTP E(): 2e-91. (292 aa)
BF3490Transcription regulator; Similar to gp:AL935262_70 [Lactobacillus plantarum WCFS1], percent identity 23 in 266 aa, BLASTP E(): 3e-15. (279 aa)
BF3539Transcriptional regulator; Similar to C-terminal of gp:AE016934_49 [Bacteroides thetaiotaomicron VPI-5482], percent identity 72 in 187 aa, BLASTP E(): 1e-76, Truncated by frameshift mutation. (192 aa)
BF3851Transcriptional regulator; Similar to gp:AE016946_82 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 594 aa, BLASTP E(): 9e-44. (607 aa)
BF4305Transcriptional regulator; Similar to gp:AE016928_241 [Bacteroides thetaiotaomicron VPI-5482], percent identity 54 in 297 aa, BLASTP E(): 9e-90. (298 aa)
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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