STRINGSTRING
BF0059 BF0059 BF0079 BF0079 BF0164 BF0164 BF0179 BF0179 BF0189 BF0189 BF0190 BF0190 BF0191 BF0191 BF0212 BF0212 BF0242 BF0242 BF0349 BF0349 BF0423 BF0423 argH argH BF0540 BF0540 BF0558 BF0558 kdpA kdpA kdpB kdpB kdpC kdpC BF0593 BF0593 BF0634 BF0634 BF0683 BF0683 BF0684 BF0684 BF0843 BF0843 BF0861 BF0861 nuoK nuoK nuoI nuoI nuoC nuoC nuoB nuoB BF0872 BF0872 tatC tatC tatA tatA BF0921 BF0921 BF1125 BF1125 BF1210 BF1210 BF1222 BF1222 BF1240 BF1240 BF1244 BF1244 mutS2 mutS2 BF1298 BF1298 BF1307 BF1307 BF1447 BF1447 BF1462 BF1462 BF1497 BF1497 BF1589 BF1589 BF1595 BF1595 BF1609 BF1609 BF1610 BF1610 BF1636 BF1636 BF1638 BF1638 BF1673 BF1673 BF1682 BF1682 BF1701 BF1701 BF1765 BF1765 BF1770 BF1770 BF1783 BF1783 BF1802 BF1802 BF1872 BF1872 BF1897 BF1897 BF1919 BF1919 BF1932 BF1932 BF1972 BF1972 BF2091 BF2091 BF2096 BF2096 BF2124 BF2124 BF2125 BF2125 BF2153 BF2153 BF2155 BF2155 BF2157 BF2157 BF2158 BF2158 atpD atpD BF2172 BF2172 atpB atpB atpE atpE atpF atpF atpH atpH atpA atpA atpG atpG BF2183 BF2183 BF2228 BF2228 BF2302 BF2302 BF2368 BF2368 BF2373 BF2373 BF2391 BF2391 BF2392 BF2392 BF2393 BF2393 BF2462 BF2462 potA potA BF2728 BF2728 BF2729 BF2729 BF2730 BF2730 BF2731 BF2731 atpA-2 atpA-2 BF2733 BF2733 BF2734 BF2734 BF2768 BF2768 BF2773 BF2773 BF2899 BF2899 BF2933 BF2933 BF2954 BF2954 BF2998 BF2998 BF2999 BF2999 BF3067 BF3067 BF3108 BF3108 BF3109 BF3109 BF3110 BF3110 BF3149 BF3149 BF3151 BF3151 BF3152 BF3152 BF3254 BF3254 BF3311 BF3311 BF3312 BF3312 BF3332 BF3332 BF3334 BF3334 BF3335 BF3335 BF3336 BF3336 BF3361 BF3361 BF3362 BF3362 BF3403 BF3403 BF3512 BF3512 BF3513 BF3513 BF3541 BF3541 BF3542 BF3542 BF3543 BF3543 BF3544 BF3544 BF3566 BF3566 BF3717 BF3717 BF3721 BF3721 BF3768 BF3768 BF3849 BF3849 BF3883 BF3883 BF3889 BF3889 BF3892 BF3892 BF3904 BF3904 BF4005 BF4005 BF4028 BF4028 BF4029 BF4029 BF4037 BF4037 BF4083 BF4083 BF4084 BF4084 BF4103 BF4103 BF4140 BF4140 BF4141 BF4141 BF4216 BF4216 BF4434 BF4434 BF4435 BF4435 BF4478 BF4478 BF4490 BF4490 BF4521 BF4521 BF4522 BF4522 BF4553 BF4553 BF4560 BF4560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF00592-amino-4-hydroxy-6- hydroxymethyldihydropteridine; Similar to gp:AE016939_126 [Bacteroides thetaiotaomicron VPI-5482], percent identity 65 in 152 aa, BLASTP E(): 7e-50. (153 aa)
BF0079Putative metal ABC transporter ATP-binding protein; Similar to gp:AE016939_158 [Bacteroides thetaiotaomicron VPI-5482], percent identity 73 in 272 aa, BLASTP E(): e-111. (269 aa)
BF0164Polysaccharide biosynthesis protein; Similar to gp:AE016939_197 [Bacteroides thetaiotaomicron VPI-5482], percent identity 61 in 498 aa, BLASTP E(): e-180. (510 aa)
BF0179Conserved hypothetical protein; Similar to gp:AE016940_18 [Bacteroides thetaiotaomicron VPI-5482], percent identity 83 in 206 aa, BLASTP E(): e-105. (214 aa)
BF0189Outer membrane protein oprM precursor; Similar to gp:AE016940_38 [Bacteroides thetaiotaomicron VPI-5482], percent identity 77 in 463 aa, BLASTP E(): 0.0. (463 aa)
BF0190AcrB/AcrD family multidrug resistance protein; Similar to gp:AE016940_39 [Bacteroides thetaiotaomicron VPI-5482], percent identity 75 in 1071 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1067 aa)
BF0191AcrA/AcrE family multidrug resistance protein; Similar to gp:AE016940_40 [Bacteroides thetaiotaomicron VPI-5482], percent identity 61 in 381 aa, BLASTP E(): e-132; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (384 aa)
BF0212Hypothetical protein. (361 aa)
BF0242Conserved hypothetical protein; Similar to gp:AE016940_98 [Bacteroides thetaiotaomicron VPI-5482], percent identity 62 in 170 aa, BLASTP E(): 5e-49. (171 aa)
BF0349Glutaminase; Similar to gp:AE016941_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 826 aa, BLASTP E(): 0.0. (837 aa)
BF0423Conserved hypothetical protein; Similar to gp:AE016931_205 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 430 aa, BLASTP E(): e-139. (421 aa)
argHArgininosuccinate lyase; Similar to gp:AE016942_6 [Bacteroides thetaiotaomicron VPI-5482], percent identity 94 in 446 aa, BLASTP E(): 0.0. (447 aa)
BF0540Putative potassium channel subunit; Similar to gp:AE016936_159 [Bacteroides thetaiotaomicron VPI-5482], percent identity 83 in 237 aa, BLASTP E(): e-114. (245 aa)
BF0558Membrane fusion efflux protein; Similar to gp:AE016936_84 [Bacteroides thetaiotaomicron VPI-5482], percent identity 82 in 366 aa, BLASTP E(): e-170; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (366 aa)
kdpAK+-transporting ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (568 aa)
kdpBK+-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (682 aa)
kdpCK+-transporting ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. (191 aa)
BF0593Conserved hypothetical protein; Similar to gp:AE016936_4 [Bacteroides thetaiotaomicron VPI-5482], percent identity 72 in 615 aa, BLASTP E(): 0.0. (636 aa)
BF0634Hypothetical protein; Similar to gp:SCO939123_109 [Streptomyces coelicolor A3(2)], percent identity 40 in 90 aa, BLASTP E(): 3e-15. (216 aa)
BF0683Multidrug efflux membrane fusion protein; Similar to gp:AE016935_99 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 1010 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1011 aa)
BF0684Putative membrane fusion protein precursor; Similar to gp:AE016935_98 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 360 aa, BLASTP E(): e-163; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (360 aa)
BF0843Corrinoid methyltransferase protein; Similar to gp:AE016927_73 [Bacteroides thetaiotaomicron VPI-5482], percent identity 65 in 208 aa, BLASTP E(): 2e-74. (216 aa)
BF0861NADH dehydrogenase I chain M; Similar to gp:AE016943_104 [Bacteroides thetaiotaomicron VPI-5482], percent identity 94 in 494 aa, BLASTP E(): 0.0. (494 aa)
nuoKNADH dehydrogenase I chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (103 aa)
nuoINADH dehydrogenase I chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (159 aa)
nuoCNADH dehydrogenase I chain D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); In the N-terminal section; belongs to the complex I 30 kDa subunit family. (530 aa)
nuoBNADH dehydrogenase I chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (196 aa)
BF0872Trk system K+ uptake protein TrkA; Similar to gp:AE016943_143 [Bacteroides thetaiotaomicron VPI-5482], percent identity 94 in 446 aa, BLASTP E(): 0.0. (446 aa)
tatCPutative Sec-independent protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (264 aa)
tatAPutative Sec-independent protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (75 aa)
BF0921Flotillin-like protein; Similar to gp:AE016944_76 [Bacteroides thetaiotaomicron VPI-5482], percent identity 94 in 537 aa, BLASTP E(): 0.0. (541 aa)
BF1125Conserved hypothetical protein; Similar to gp:AE016937_98 [Bacteroides thetaiotaomicron VPI-5482], percent identity 34 in 400 aa, BLASTP E(): 3e-61. (394 aa)
BF1210Hypothetical protein. (175 aa)
BF1222Putative capsule polysaccharide export protein; Similar to gp:AE016931_147 [Bacteroides thetaiotaomicron VPI-5482], percent identity 52 in 706 aa, BLASTP E(): 0.0. (720 aa)
BF1240Voltage-gated chloride channel protein; Similar to gp:AE016946_35 [Bacteroides thetaiotaomicron VPI-5482], percent identity 86 in 516 aa, BLASTP E(): 0.0. (523 aa)
BF1244Putative K+ uptake system protein; Similar to gp:AE016946_51 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 228 aa, BLASTP E(): e-101. (228 aa)
mutS2DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (832 aa)
BF1298Putative outer membrane protein; Similar to sp:OM40_PORGI [Porphyromonas gingivalis], percent identity 32 in 395 aa, BLASTP E(): 2e-46. (378 aa)
BF1307Putative Na+/H+ antiporter; Similar to gp:AE016945_229 [Bacteroides thetaiotaomicron VPI-5482], percent identity 84 in 753 aa, BLASTP E(): 0.0. (754 aa)
BF1447Putative transporter; Similar to gp:AF189282_14 [Bacteroides fragilis NCTC9343], percent identity 100 in 621 aa, BLASTP E(): 0.0. (621 aa)
BF1462Conserved hypothetical protein; Similar to gp:AE016932_105 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 429 aa, BLASTP E(): 0.0. (429 aa)
BF1497ABC transporter permease; Similar to gp:AE016932_68 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 415 aa, BLASTP E(): 0.0. (415 aa)
BF1589ABC transporter permease protein; Similar to gp:AE016932_7 [Bacteroides thetaiotaomicron VPI-5482], percent identity 81 in 385 aa, BLASTP E(): 0.0. (435 aa)
BF1595ABC transporter permease; Similar to gp:AE016931_258 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 415 aa, BLASTP E(): 0.0; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (415 aa)
BF1609Conserved hypothetical protein; Similar to gp:AE016931_243 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 481 aa, BLASTP E(): 0.0. (482 aa)
BF1610Conserved hypothetical protein; Similar to gp:AE016931_242 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 195 aa, BLASTP E(): 1e-91. (195 aa)
BF1636Conserved hypothetical protein; Similar to gp:AE016927_56 [Bacteroides thetaiotaomicron VPI-5482], percent identity 63 in 303 aa, BLASTP E(): e-104. (297 aa)
BF1638Conserved hypothetical protein; Similar to gp:AE016927_58 [Bacteroides thetaiotaomicron VPI-5482], percent identity 57 in 151 aa, BLASTP E(): 6e-42. (175 aa)
BF1673Outer membrane porin F precursor; Similar to gp:AE016927_151 [Bacteroides thetaiotaomicron VPI-5482], percent identity 35 in 386 aa, BLASTP E(): 1e-41. (373 aa)
BF1682Major outer membrane protein OmpA; Similar to gp:AY028459_1 [Bacteroides fragilis NCTC9343], percent identity 35 in 369 aa, BLASTP E(): 7e-46. (372 aa)
BF1701Putative capsule polysaccharide export protein; Similar to gp:AE016931_147 [Bacteroides thetaiotaomicron VPI-5482], percent identity 51 in 840 aa, BLASTP E(): 0.0. (852 aa)
BF1765Conserved hypothetical protein; Similar to gp:AE016931_242 [Bacteroides thetaiotaomicron VPI-5482], percent identity 36 in 167 aa, BLASTP E(): 3e-24. (201 aa)
BF1770Conserved hypothetical protein; Similar to pir:A82488, percent identity 30 in 336 aa, BLASTP E(): 2e-33. (386 aa)
BF1783Conserved hypothetical protein; Similar to gp:AE016931_243 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 335 aa, BLASTP E(): 8e-28. (370 aa)
BF1802Conserved hypothetical protein; Similar to gp:AE016930_83 [Bacteroides thetaiotaomicron VPI-5482], percent identity 30 in 315 aa, BLASTP E(): 7e-33. (394 aa)
BF1872Periplasmic component of efflux system; Similar to gp:AE016931_4 [Bacteroides thetaiotaomicron VPI-5482], percent identity 82 in 406 aa, BLASTP E(): 0.0; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (407 aa)
BF1897OmpA family outer membrane protein; Similar to gp:AE016930_213 [Bacteroides thetaiotaomicron VPI-5482], percent identity 57 in 235 aa, BLASTP E(): 2e-66. (224 aa)
BF1919Hypothetical protein; Similar to gp:AF104937_1 [Riemerella anatipestifer], percent identity 44 in 108 aa, BLASTP E(): 7e-17. (399 aa)
BF1932Polysialic acid transport protein; Similar to gp:AE016933_10 [Bacteroides thetaiotaomicron VPI-5482], percent identity 53 in 702 aa, BLASTP E(): 0.0. (749 aa)
BF1972Hypothetical protein. (143 aa)
BF2091Cation efflux system protein; Similar to gpu:AE017172_57 [Porphyromonas gingivalis W83], percent identity 62 in 325 aa, BLASTP E(): e-116; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (402 aa)
BF2096Hypothetical protein. (244 aa)
BF2124Conserved hypothetical protein; Similar to gp:AE016930_85 [Bacteroides thetaiotaomicron VPI-5482], percent identity 56 in 189 aa, BLASTP E(): 2e-55. (188 aa)
BF2125Conserved hypothetical protein; Similar to gpu:AE017179_99 [Porphyromonas gingivalis W83], percent identity 36 in 493 aa, BLASTP E(): 3e-82. (486 aa)
BF2153ABC transporter permease protein; Similar to gp:AE016928_208 [Bacteroides thetaiotaomicron VPI-5482], percent identity 45 in 773 aa, BLASTP E(): 0.0. (762 aa)
BF2155ABC transporter permease protein; Similar to gp:AE016928_208 [Bacteroides thetaiotaomicron VPI-5482], percent identity 40 in 782 aa, BLASTP E(): e-159. (768 aa)
BF2157ABC transporter permease protein; Similar to gp:AE016928_208 [Bacteroides thetaiotaomicron VPI-5482], percent identity 41 in 781 aa, BLASTP E(): e-161. (768 aa)
BF2158ABC transporter permease protein; Similar to gp:AE016928_206 [Bacteroides thetaiotaomicron VPI-5482], percent identity 43 in 775 aa, BLASTP E(): e-174. (764 aa)
atpDATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (505 aa)
BF2172ATP synthase epsilon chain; Similar to gp:AE016928_225 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 81 aa, BLASTP E(): 1e-29. (81 aa)
atpBATP synthase A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (383 aa)
atpEATP synthase C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (85 aa)
atpFATP synthase B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (165 aa)
atpHATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (186 aa)
atpAATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (527 aa)
atpGATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (290 aa)
BF2183Cation efflux system protein CzcB; Similar to gp:AE016928_192 [Bacteroides thetaiotaomicron VPI-5482], percent identity 72 in 364 aa, BLASTP E(): e-155; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (363 aa)
BF2228Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Similar to gp:AE016929_14 [Bacteroides thetaiotaomicron VPI-5482], percent identity 76 in 122 aa, BLASTP E(): 2e-48. (122 aa)
BF2302Conserved hypothetical protein; Similar to gp:AE016929_104 [Bacteroides thetaiotaomicron VPI-5482], percent identity 82 in 365 aa, BLASTP E(): e-175. (365 aa)
BF2368Probable ABC transporter permease; Similar to gp:AE016929_128 [Bacteroides thetaiotaomicron VPI-5482], percent identity 82 in 416 aa, BLASTP E(): 0.0; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (416 aa)
BF2373Putative ABC-transporter permease protein; Similar to gp:AE016929_132 [Bacteroides thetaiotaomicron VPI-5482], percent identity 23 in 805 aa, BLASTP E(): 6e-35. (742 aa)
BF2391Outer membrane efflux protein oprM precursor; Similar to gp:AE016929_154 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 463 aa, BLASTP E(): 0.0. (468 aa)
BF2392Putative cation efflux pump; Similar to gp:AE016929_155 [Bacteroides thetaiotaomicron VPI-5482], percent identity 73 in 365 aa, BLASTP E(): e-154; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (379 aa)
BF2393Putative cation efflux pump; Similar to gp:AE016929_156 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 1039 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1040 aa)
BF2462Conserved hypothetical protein related to phage; Similar to pir:A97134, percent identity 34 in 94 aa, BLASTP E(): 2e-07. (111 aa)
potASpermidine/putrescine transport ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (470 aa)
BF2728V-type sodium ATP synthase subunit K; Similar to gp:AE016931_86 [Bacteroides thetaiotaomicron VPI-5482], percent identity 99 in 153 aa, BLASTP E(): 2e-78. (153 aa)
BF2729V-type ATP synthase subunit I; Similar to gp:AE016931_87 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 600 aa, BLASTP E(): 0.0; Belongs to the V-ATPase 116 kDa subunit family. (605 aa)
BF2730V-type ATP synthase subunit D; Similar to gp:AE016931_88 [Bacteroides thetaiotaomicron VPI-5482], percent identity 94 in 201 aa, BLASTP E(): e-103. (201 aa)
BF2731V-type ATP synthase subunit B; Similar to gp:AE016931_89 [Bacteroides thetaiotaomicron VPI-5482], percent identity 97 in 439 aa, BLASTP E(): 0.0. (439 aa)
atpA-2V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (585 aa)
BF2733Conserved hypothetical protein; Similar to gp:AE016931_91 [Bacteroides thetaiotaomicron VPI-5482], percent identity 87 in 278 aa, BLASTP E(): e-138. (279 aa)
BF2734ATP synthase subunit E; Similar to gp:AE016931_92 [Bacteroides thetaiotaomicron VPI-5482], percent identity 89 in 196 aa, BLASTP E(): 3e-95. (196 aa)
BF2768Polysaccharide export outer membrane protein; Similar to gp:AE016927_131 [Bacteroides thetaiotaomicron VPI-5482], percent identity 66 in 260 aa, BLASTP E(): 3e-95. (262 aa)
BF2773Conserved hypothetical protein; Similar to gp:AE016934_68 [Bacteroides thetaiotaomicron VPI-5482], percent identity 40 in 762 aa, BLASTP E(): e-157. (767 aa)
BF2899Putative outer membrane protein; Similar to gp: AY028459_1 [Bacteroides fragilis NCTC9343], percent identity 29 in 221 aa, BLASTP E(): 3e-17. (480 aa)
BF2933Major outer membrane protein OmpA; Similar to gp:AE016936_29 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 358 aa, BLASTP E(): 4e-06. (365 aa)
BF2954Hypothetical protein. (78 aa)
BF2998Conserved hypothetical protein; Similar to gp:AE016931_243 [Bacteroides thetaiotaomicron VPI-5482], percent identity 24 in 465 aa, BLASTP E(): 2e-22. (467 aa)
BF2999Conserved hypothetical protein; Similar to gpu:AE017179_98 [Porphyromonas gingivalis W83], percent identity 43 in 186 aa, BLASTP E(): 2e-43. (185 aa)
BF3067Trimethylamine corrinoid protein; Similar to gp:AE016927_73 [Bacteroides thetaiotaomicron VPI-5482], percent identity 66 in 204 aa, BLASTP E(): 9e-73. (211 aa)
BF3108Outer membrane protein oprM precursor; Similar to gp:AE016927_39 [Bacteroides thetaiotaomicron VPI-5482], percent identity 87 in 456 aa, BLASTP E(): 0.0. (458 aa)
BF3109Putative aminoglycoside efflux pump; Similar to gp:AE016927_38 [Bacteroides thetaiotaomicron VPI-5482], percent identity 91 in 1029 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1048 aa)
BF3110Acriflavine resistance protein A precursor; Similar to gp:AE016927_37 [Bacteroides thetaiotaomicron VPI-5482], percent identity 87 in 395 aa, BLASTP E(): 0.0; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (396 aa)
BF3149Drug efflux protein; Similar to gp:AE016928_185 [Bacteroides thetaiotaomicron VPI-5482], percent identity 73 in 1072 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1067 aa)
BF3151Putative cation efflux system; Similar to gp:AE016928_183 [Bacteroides thetaiotaomicron VPI-5482], percent identity 82 in 1023 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1025 aa)
BF3152Putative cation efflux system protein; Similar to gp:AE016928_182 [Bacteroides thetaiotaomicron VPI-5482], percent identity 71 in 363 aa, BLASTP E(): e-138; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (356 aa)
BF3254Putative molybdenum transport ATP-binding protein; Similar to gp:AE016932_194 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 484 aa, BLASTP E(): 0.0. (484 aa)
BF3311Putative multidrug resistance protein; Similar to gp:AE016932_225 [Bacteroides thetaiotaomicron VPI-5482], percent identity 74 in 347 aa, BLASTP E(): e-148; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (350 aa)
BF3312AcrB/D/F family transporter; Similar to gp:AE016932_226 [Bacteroides thetaiotaomicron VPI-5482], percent identity 89 in 1011 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1011 aa)
BF3332Pyruvate-flavodoxin oxidoreductase; Similar to gp:AE016933_34 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 1182 aa, BLASTP E(): 0.0. (1184 aa)
BF3334Glycine betaine-binding protein precursor; Similar to gp:AE016933_36 [Bacteroides thetaiotaomicron VPI-5482], percent identity 65 in 266 aa, BLASTP E(): e-102. (284 aa)
BF3335Glycine betaine/L-proline transport system permease; Similar to gp:AE016933_37 [Bacteroides thetaiotaomicron VPI-5482], percent identity 84 in 275 aa, BLASTP E(): e-131. (274 aa)
BF3336Glycine betaine transport ATP-binding protein; Similar to gp:AE016933_38 [Bacteroides thetaiotaomicron VPI-5482], percent identity 89 in 408 aa, BLASTP E(): 0.0. (408 aa)
BF3361AcrB/D/F family transporter; Similar to gp:AE016934_199 [Bacteroides thetaiotaomicron VPI-5482], percent identity 83 in 1041 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1041 aa)
BF3362Transmembrane protein precursor possibly involved in transport; Similar to gp:AE016934_200 [Bacteroides thetaiotaomicron VPI-5482], percent identity 66 in 356 aa, BLASTP E(): e-131; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (355 aa)
BF3403Conserved hypothetical protein; Similar to gp:AE016931_242 [Bacteroides thetaiotaomicron VPI-5482], percent identity 47 in 164 aa, BLASTP E(): 1e-38. (180 aa)
BF3512Hypothetical protein; Similar to gp:AE016936_246 [Bacteroides thetaiotaomicron VPI-5482], percent identity 24 in 275 aa, BLASTP E(): 6e-08. (1001 aa)
BF3513Conserved hypothetical protein; Similar to gp:AE016937_1 [Bacteroides thetaiotaomicron VPI-5482], percent identity 39 in 194 aa, BLASTP E(): 5e-34. (187 aa)
BF3541Multidrug efflux protein; Similar to N-terminal of gp:AE016934_48 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 266 aa, BLASTP E(): e-115, Truncated by frameshift mutation; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (304 aa)
BF3542Multidrug efflux protein; Similar to C-terminal of gp:AE016934_48 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 87 aa, BLASTP E(): 6e-34, Truncated by frameshift mutation. (92 aa)
BF3543AcrB/AcrD family multidrug resistance protein; Similar to gp:AE016934_47 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 1062 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1068 aa)
BF3544Multidrug efflux pump channel protein; Similar to gp:AE016934_46 [Bacteroides thetaiotaomicron VPI-5482], percent identity 75 in 467 aa, BLASTP E(): 0.0. (475 aa)
BF3566Voltage-gated K+ channel protein; Similar to gp:AE016945_130 [Bacteroides thetaiotaomicron VPI-5482], percent identity 80 in 279 aa, BLASTP E(): e-131. (299 aa)
BF3717Putative ABC transporter ATP-binding protein; Similar to gp:AE016934_116 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 544 aa, BLASTP E(): 0.0. (544 aa)
BF3721Cation efflux system protein; Similar to gp:AE016934_119 [Bacteroides thetaiotaomicron VPI-5482], percent identity 79 in 424 aa, BLASTP E(): 0.0; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (405 aa)
BF3768Putative outer membrane protein; Similar to gp:AE016942_125 [Bacteroides thetaiotaomicron VPI-5482], percent identity 24 in 379 aa, BLASTP E(): 1e-10. (442 aa)
BF3849Hypothetical protein; Similar to gp:AE016931_242 [Bacteroides thetaiotaomicron VPI-5482], percent identity 31 in 161 aa, BLASTP E(): 3e-16. (493 aa)
BF3883Putative DNA mismatch repair protein; Similar to gp:AE016935_26 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 354 aa, BLASTP E(): e-158. (349 aa)
BF3889Cation efflux system protein; Similar to gp:AE016943_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 70 in 308 aa, BLASTP E(): e-118; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (295 aa)
BF3892Putative hydrogenase; Similar to gp:AE016933_121 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 482 aa, BLASTP E(): 0.0. (489 aa)
BF3904Putative chloride channel protein; Similar to gp:AE016942_217 [Bacteroides thetaiotaomicron VPI-5482], percent identity 90 in 598 aa, BLASTP E(): 0.0. (597 aa)
BF4005Hypothetical protein. (196 aa)
BF4028Conserved hypothetical protein; Similar to gp:AF145800_1 [Porphyromonas gingivalis], percent identity 25 in 613 aa, BLASTP E(): 7e-18. (616 aa)
BF4029Conserved hypothetical protein; Similar to gp:AE016931_242 [Bacteroides thetaiotaomicron VPI-5482], percent identity 30 in 174 aa, BLASTP E(): 4e-16. (198 aa)
BF4037Major outer membrane protein OmpA; Similar to gp:AY028459_1 [Bacteroides fragilis NCTC9343], percent identity 100 in 395 aa, BLASTP E(): 0.0. (395 aa)
BF4083ABC transporter ATP-binding protein; Similar to gp:AE016942_110 [Bacteroides thetaiotaomicron VPI-5482], percent identity 98 in 251 aa, BLASTP E(): e-135. (253 aa)
BF4084Conserved hypothetical protein; Similar to gp:AE016942_111 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 247 aa, BLASTP E(): e-127. (247 aa)
BF4103ABC transporter ATP-binding protein; Similar to gp:AE016942_82 [Bacteroides thetaiotaomicron VPI-5482], percent identity 89 in 649 aa, BLASTP E(): 0.0. (651 aa)
BF4140Putative cation efflux transporter; Similar to gp:AE016937_26 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 1052 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1052 aa)
BF4141Cation efflux system protein; Similar to gp:AE016937_27 [Bacteroides thetaiotaomicron VPI-5482], percent identity 81 in 338 aa, BLASTP E(): e-159; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (338 aa)
BF4216Conserved hypothetical protein; Similar to gp:AE016937_98 [Bacteroides thetaiotaomicron VPI-5482], percent identity 80 in 395 aa, BLASTP E(): 0.0. (395 aa)
BF4434Hypothetical protein. (553 aa)
BF4435Conserved hypothetical protein; Similar to gp:AE016930_85 [Bacteroides thetaiotaomicron VPI-5482], percent identity 36 in 193 aa, BLASTP E(): 1e-25. (186 aa)
BF4478Conserved hypothetical protein; Similar to gp:AE016937_178 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 410 aa, BLASTP E(): 0.0. (412 aa)
BF4490Conserved hypothetical protein; Similar to gp:AE016938_3 [Bacteroides thetaiotaomicron VPI-5482], percent identity 70 in 677 aa, BLASTP E(): 0.0. (677 aa)
BF4521AcrB/D/F family transporter; Similar to gp:AE016931_59 [Bacteroides thetaiotaomicron VPI-5482], percent identity 83 in 1010 aa, BLASTP E(): 0.0; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1010 aa)
BF4522Component of multidrug efflux system; Similar to gp:AE016931_60 [Bacteroides thetaiotaomicron VPI-5482], percent identity 60 in 337 aa, BLASTP E(): e-112; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (347 aa)
BF4553Fumarate reductase iron-sulfur cluster protein subunit; Similar to gpu:AY174185_3 [Bacteroides fragilis TM4000], percent identity 100 in 251 aa, BLASTP E(): 3e-145. (251 aa)
BF4560Conserved hypothetical protein; Similar to gp:AE016938_165 [Bacteroides thetaiotaomicron VPI-5482], percent identity 62 in 298 aa, BLASTP E(): e-102. (339 aa)
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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