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BF1291 BF1291 BF0001 BF0001 BF2977 BF2977 BF2280 BF2280
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF1291Putative rRNA methylase; Similar to gp:AE016945_157 [Bacteroides thetaiotaomicron VPI-5482], percent identity 83 in 265 aa, BLASTP E(): e-124. (270 aa)
BF0001tRNA/rRNA methyltransferase; Similar to gp:AE016939_75 [Bacteroides thetaiotaomicron VPI-5482], percent identity 90 in 175 aa, BLASTP E(): 4e-90. (175 aa)
BF2977tRNA/rRNA methyltransferase; Similar to gp:AE016931_151 [Bacteroides thetaiotaomicron VPI-5482], percent identity 94 in 246 aa, BLASTP E(): e-129; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (246 aa)
BF2280Putative tRNA/rRNA methyltransferase; Similar to gp:AE016929_81 [Bacteroides thetaiotaomicron VPI-5482], percent identity 77 in 250 aa, BLASTP E(): e-112; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (253 aa)
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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