STRINGSTRING
BF1672 BF1672 BF0652 BF0652 BF0939 BF0939 BF3490 BF3490
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF1672Hypothetical protein. (132 aa)
BF0652Putative transcriptional regulator; Similar to gp:AE016812_175 [Vibrio vulnificus CMCP6], percent identity 23 in 269 aa, BLASTP E(): 1e-15. (280 aa)
BF0939Transcriptional regulator; Similar to gp:AE016945_40 [Bacteroides thetaiotaomicron VPI-5482], percent identity 61 in 298 aa, BLASTP E(): e-103. (318 aa)
BF3490Transcription regulator; Similar to gp:AL935262_70 [Lactobacillus plantarum WCFS1], percent identity 23 in 266 aa, BLASTP E(): 3e-15. (279 aa)
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.