STRINGSTRING
BF3154 BF3154 tdk tdk BF0181 BF0181 BF0180 BF0180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF3154Signal peptidase I; Similar to gp:AE012902_7 [Chlorobium tepidum TLS], percent identity 33 in 277 aa, BLASTP E(): 2e-30; Belongs to the peptidase S26 family. (296 aa)
tdkThymidine kinase; Similar to gp:AE016935_122 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 198 aa, BLASTP E(): e-100. (199 aa)
BF0181Signal peptidase I; Similar to gp:AE016940_20 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 494 aa, BLASTP E(): 0.0. (494 aa)
BF0180Signal peptidase I; Similar to gp:AE016940_19 [Bacteroides thetaiotaomicron VPI-5482], percent identity 75 in 306 aa, BLASTP E(): e-137; Belongs to the peptidase S26 family. (311 aa)
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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