(57 nodes) Mixed, incl. Extracellular matrix organization, and TLC domain network (Micromonas commoda)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MICPUN_55957	Fe2OG dioxygenase domain-containing protein. (351 aa)
	MICPUN_55818	Uncharacterized protein. (983 aa)
	MICPUN_55750	Uncharacterized protein. (179 aa)
	MICPUN_105075	Prolyl 4-hydroxylase. (454 aa)
	MICPUN_99045	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (510 aa)
	MICPUN_56257	Uncharacterized protein. (275 aa)
	MICPUN_56709	Uncharacterized protein. (334 aa)
	MICPUN_56827	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (568 aa)
	MICPUN_107931	TLC domain-containing protein. (241 aa)
	MICPUN_99653	Uncharacterized protein. (1034 aa)
	MICPUN_74715	Uncharacterized protein. (58 aa)
	MICPUN_57955	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (1047 aa)
	MICPUN_80558	Formin-like protein; Belongs to the formin-like family. (399 aa)
	MICPUN_57539	Uncharacterized protein. (953 aa)
	MICPUN_100375	Calcium-dependent cytoplasmic cysteine proteinase, papain-like protein; Belongs to the peptidase C2 family. (489 aa)
	MICPUN_100385	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (268 aa)
	MICPUN_108234	TLC domain-containing protein. (312 aa)
	MICPUN_58565	Uncharacterized protein. (3315 aa)
	MICPUN_108387	Uncharacterized protein. (242 aa)
	FAP47	Flagellar associated protein. (2921 aa)
	MICPUN_108469	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (230 aa)
	MICPUN_59448	Uncharacterized protein. (746 aa)
	PP1	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (325 aa)
	MICPUN_59999	Uncharacterized protein. (1830 aa)
	MICPUN_60043	Uncharacterized protein. (348 aa)
	MICPUN_60171	Uncharacterized protein. (1577 aa)
	MICPUN_60187	TLC domain-containing protein. (334 aa)
	MICPUN_108880	Uncharacterized protein; Belongs to the calmodulin family. (279 aa)
	MICPUN_102449	Uncharacterized protein. (920 aa)
	MICPUN_102454	Uncharacterized protein. (297 aa)
	MICPUN_102458	Fe2OG dioxygenase domain-containing protein. (380 aa)
	MICPUN_70761	Fe2OG dioxygenase domain-containing protein. (267 aa)
	MICPUN_72338	Uncharacterized protein. (121 aa)
	MICPUN_62720	Uncharacterized protein. (439 aa)
	MICPUN_71386	Fe2OG dioxygenase domain-containing protein. (215 aa)
	MICPUN_62780	Fe2OG dioxygenase domain-containing protein. (400 aa)
	FAP74	Flagellar associated protein FAP74. (1737 aa)
	MICPUN_63555	Uncharacterized protein. (3105 aa)
	MICPUN_104071	Uncharacterized protein. (1596 aa)
	FAP42	Flagellar associated protein; Belongs to the peptidase C2 family. (2428 aa)
	MICPUN_64074	Uncharacterized protein. (299 aa)
	MICPUN_77172	Uncharacterized protein. (82 aa)
	MICPUN_104395	Uncharacterized protein. (1214 aa)
	PF16	Uncharacterized protein. (508 aa)
	MICPUN_98515	Uncharacterized protein. (512 aa)
	MICPUN_55182	Uncharacterized protein. (433 aa)
	MICPUN_108722	Uncharacterized protein. (220 aa)
	MICPUN_60672	Uncharacterized protein. (2372 aa)
	CPC1	Central pair complex 1. (1944 aa)
	MICPUN_70768	Fe2OG dioxygenase domain-containing protein. (262 aa)
	MICPUN_102832	Fe2OG dioxygenase domain-containing protein. (238 aa)
	MICPUN_62211	Pyrroline-5-carboxylate reductase. (500 aa)
	MICPUN_71136	Fe2OG dioxygenase domain-containing protein. (253 aa)
	PF6	Central pair protein. (2046 aa)
	MICPUN_76150	Uncharacterized protein. (235 aa)
	MICPUN_73517	Uncharacterized protein. (97 aa)
	HYDIN	Hydrocephalus 3-like protein. (5141 aa)

Your Current Organism:

Micromonas commoda

NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPC1	FAP42	C1FGT9	C1EGZ2	Central pair complex 1.	Flagellar associated protein; Belongs to the peptidase C2 family.	0.924
CPC1	FAP47	C1FGT9	C1E8C4	Central pair complex 1.	Flagellar associated protein.	0.786
CPC1	FAP74	C1FGT9	C1EFG8	Central pair complex 1.	Flagellar associated protein FAP74.	0.848
CPC1	HYDIN	C1FGT9	C1FJ91	Central pair complex 1.	Hydrocephalus 3-like protein.	0.794
CPC1	MICPUN_102449	C1FGT9	C1ECX0	Central pair complex 1.	Uncharacterized protein.	0.808
CPC1	MICPUN_104071	C1FGT9	C1EGX9	Central pair complex 1.	Uncharacterized protein.	0.786
CPC1	MICPUN_104395	C1FGT9	C1EID6	Central pair complex 1.	Uncharacterized protein.	0.870
CPC1	MICPUN_108387	C1FGT9	C1E7M4	Central pair complex 1.	Uncharacterized protein.	0.720
CPC1	MICPUN_108880	C1FGT9	C1EC04	Central pair complex 1.	Uncharacterized protein; Belongs to the calmodulin family.	0.720
CPC1	MICPUN_55818	C1FGT9	C1DYV0	Central pair complex 1.	Uncharacterized protein.	0.786
CPC1	MICPUN_59448	C1FGT9	C1E8P4	Central pair complex 1.	Uncharacterized protein.	0.786
CPC1	MICPUN_59999	C1FGT9	C1EA99	Central pair complex 1.	Uncharacterized protein.	0.800
CPC1	MICPUN_60672	C1FGT9	C1FFY4	Central pair complex 1.	Uncharacterized protein.	0.926
CPC1	MICPUN_63555	C1FGT9	C1EG90	Central pair complex 1.	Uncharacterized protein.	0.899
CPC1	MICPUN_64074	C1FGT9	C1EH19	Central pair complex 1.	Uncharacterized protein.	0.920
CPC1	MICPUN_73517	C1FGT9	C1FIZ0	Central pair complex 1.	Uncharacterized protein.	0.786
CPC1	MICPUN_76150	C1FGT9	C1FIV8	Central pair complex 1.	Uncharacterized protein.	0.861
CPC1	MICPUN_77172	C1FGT9	C1EH93	Central pair complex 1.	Uncharacterized protein.	0.921
CPC1	MICPUN_99653	C1FGT9	C1E2I5	Central pair complex 1.	Uncharacterized protein.	0.786
CPC1	PF16	C1FGT9	C1EIS7	Central pair complex 1.	Uncharacterized protein.	0.945

page 1 of 28

Server load: low (32%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About