26 items (Micromonas commoda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MICPUN_89912	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	MICPUN_93345	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (189 aa)
	MICPUN_107645	Ribosomal_L7Ae domain-containing protein. (249 aa)
	MICPUN_90249	S10_plectin domain-containing protein. (147 aa)
	MICPUN_93705	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (142 aa)
	MICPUN_94088	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	MICPUN_57540	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (188 aa)
	MICPUN_94345	Ribosomal_L7Ae domain-containing protein. (115 aa)
	MICPUN_91199	Uncharacterized protein. (110 aa)
	MICPUN_91267	KOW domain-containing protein. (144 aa)
	MICPUN_108678	Uncharacterized protein. (200 aa)
	MICPUN_61082	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (113 aa)
	MICPUN_91602	Uncharacterized protein. (129 aa)
	MICPUN_108906	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	MICPUN_86588	Uncharacterized protein. (115 aa)
	MICPUN_95460	Ribosomal_L2_C domain-containing protein. (261 aa)
	MICPUN_95475	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (263 aa)
	MICPUN_92321	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	MICPUN_64167	Ribosomal protein L18. (386 aa)
	MICPUN_95986	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (106 aa)
	MICPUN_95995	Uncharacterized protein. (168 aa)
	MICPUN_93104	Uncharacterized protein. (199 aa)
	MICPUN_55312	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (237 aa)
	RPL19	60S ribosomal protein L19. (195 aa)
	MICPUN_91456	Uncharacterized protein. (133 aa)
	MICPUN_107171	Uncharacterized protein. (143 aa)

Your Current Organism:

Micromonas commoda

NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MICPUN_107171	MICPUN_107645	C1FIU6	C1DZB0	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999
MICPUN_107171	MICPUN_108678	C1FIU6	C1EB36	Uncharacterized protein.	Uncharacterized protein.	0.999
MICPUN_107171	MICPUN_108906	C1FIU6	C1ECE1	Uncharacterized protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
MICPUN_107171	MICPUN_55312	C1FIU6	C1FE55	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
MICPUN_107171	MICPUN_57540	C1FIU6	C1E5B6	Uncharacterized protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
MICPUN_107171	MICPUN_61082	C1FIU6	C1EBI3	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
MICPUN_107171	MICPUN_64167	C1FIU6	C1EHB6	Uncharacterized protein.	Ribosomal protein L18.	0.999
MICPUN_107171	MICPUN_86588	C1FIU6	C1EDK3	Uncharacterized protein.	Uncharacterized protein.	0.999
MICPUN_107171	MICPUN_89912	C1FIU6	C1DYY4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
MICPUN_107171	MICPUN_90249	C1FIU6	C1E1R8	Uncharacterized protein.	S10_plectin domain-containing protein.	0.999
MICPUN_107171	MICPUN_91199	C1FIU6	C1E9W1	Uncharacterized protein.	Uncharacterized protein.	0.999
MICPUN_107171	MICPUN_91267	C1FIU6	C1EAM6	Uncharacterized protein.	KOW domain-containing protein.	0.999
MICPUN_107171	MICPUN_91456	C1FIU6	C1FFZ5	Uncharacterized protein.	Uncharacterized protein.	0.999
MICPUN_107171	MICPUN_91602	C1FIU6	C1EC03	Uncharacterized protein.	Uncharacterized protein.	0.999
MICPUN_107171	MICPUN_92321	C1FIU6	C1EFE4	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
MICPUN_107171	MICPUN_93104	C1FIU6	C1FE52	Uncharacterized protein.	Uncharacterized protein.	0.999
MICPUN_107171	MICPUN_93345	C1FIU6	C1DZ45	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
MICPUN_107171	MICPUN_93705	C1FIU6	C1E1Y5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
MICPUN_107171	MICPUN_94088	C1FIU6	C1E4X8	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
MICPUN_107171	MICPUN_94345	C1FIU6	C1E7B4	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999

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