6 items (Micromonas commoda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MICPUN_108173	Ribosomal_L18_c domain-containing protein. (297 aa)
	SEC61a	Type II secretory pathway family; Belongs to the SecY/SEC61-alpha family. (475 aa)
	MICPUN_89585	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (147 aa)
	MICPUN_91459	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (233 aa)
	MICPUN_91476	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (144 aa)
	MICPUN_106134	Uncharacterized protein. (160 aa)

Your Current Organism:

Micromonas commoda

NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MICPUN_106134	MICPUN_108173	C1FIC8	C1E4X6	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.999
MICPUN_106134	MICPUN_89585	C1FIC8	C1FDW0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
MICPUN_106134	MICPUN_91459	C1FIC8	C1FG00	Uncharacterized protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
MICPUN_106134	MICPUN_91476	C1FIC8	C1FG95	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
MICPUN_106134	SEC61a	C1FIC8	C1EEJ2	Uncharacterized protein.	Type II secretory pathway family; Belongs to the SecY/SEC61-alpha family.	0.995
MICPUN_108173	MICPUN_106134	C1E4X6	C1FIC8	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.999
MICPUN_108173	MICPUN_89585	C1E4X6	C1FDW0	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
MICPUN_108173	MICPUN_91459	C1E4X6	C1FG00	Ribosomal_L18_c domain-containing protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
MICPUN_108173	MICPUN_91476	C1E4X6	C1FG95	Ribosomal_L18_c domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
MICPUN_108173	SEC61a	C1E4X6	C1EEJ2	Ribosomal_L18_c domain-containing protein.	Type II secretory pathway family; Belongs to the SecY/SEC61-alpha family.	0.999
MICPUN_89585	MICPUN_106134	C1FDW0	C1FIC8	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
MICPUN_89585	MICPUN_108173	C1FDW0	C1E4X6	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L18_c domain-containing protein.	0.999
MICPUN_89585	MICPUN_91459	C1FDW0	C1FG00	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
MICPUN_89585	MICPUN_91476	C1FDW0	C1FG95	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
MICPUN_89585	SEC61a	C1FDW0	C1EEJ2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Type II secretory pathway family; Belongs to the SecY/SEC61-alpha family.	0.999
MICPUN_91459	MICPUN_106134	C1FG00	C1FIC8	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.999
MICPUN_91459	MICPUN_108173	C1FG00	C1E4X6	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Ribosomal_L18_c domain-containing protein.	0.999
MICPUN_91459	MICPUN_89585	C1FG00	C1FDW0	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
MICPUN_91459	MICPUN_91476	C1FG00	C1FG95	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
MICPUN_91459	SEC61a	C1FG00	C1EEJ2	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	Type II secretory pathway family; Belongs to the SecY/SEC61-alpha family.	0.999

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