17 items (Micromonas commoda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MICPUN_96004	Ribos_L4_asso_C domain-containing protein. (395 aa)
	MICPUN_107697	Uncharacterized protein. (161 aa)
	MICPUN_89912	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	MICPUN_79901	HTH La-type RNA-binding domain-containing protein. (113 aa)
	MICPUN_73028	Uncharacterized protein. (135 aa)
	MICPUN_80796	RWD domain-containing protein. (283 aa)
	MICPUN_99967	Uncharacterized protein. (396 aa)
	MICPUN_100107	ATP-binding cassette superfamily. (692 aa)
	MICPUN_80940	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (122 aa)
	MICPUN_58110	Uncharacterized protein. (1236 aa)
	MICPUN_108235	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (355 aa)
	MICPUN_91267	KOW domain-containing protein. (144 aa)
	BTF3	Nascent polypeptide-associated complex subunit beta. (136 aa)
	MICPUN_95416	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	MICPUN_92037	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (128 aa)
	MICPUN_88734	Uncharacterized protein. (168 aa)
	TOR	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2543 aa)

Your Current Organism:

Micromonas commoda

NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTF3	MICPUN_80940	C1EBZ4	C1E4C9	Nascent polypeptide-associated complex subunit beta.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.782
BTF3	MICPUN_89912	C1EBZ4	C1DYY4	Nascent polypeptide-associated complex subunit beta.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.583
BTF3	MICPUN_91267	C1EBZ4	C1EAM6	Nascent polypeptide-associated complex subunit beta.	KOW domain-containing protein.	0.890
BTF3	MICPUN_92037	C1EBZ4	C1EEJ3	Nascent polypeptide-associated complex subunit beta.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.813
BTF3	MICPUN_95416	C1EBZ4	C1EDU3	Nascent polypeptide-associated complex subunit beta.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.618
BTF3	MICPUN_96004	C1EBZ4	C1EI97	Nascent polypeptide-associated complex subunit beta.	Ribos_L4_asso_C domain-containing protein.	0.908
MICPUN_108235	MICPUN_80940	C1E5X6	C1E4C9	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.935
MICPUN_108235	MICPUN_89912	C1E5X6	C1DYY4	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.932
MICPUN_108235	MICPUN_91267	C1E5X6	C1EAM6	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	KOW domain-containing protein.	0.522
MICPUN_108235	MICPUN_92037	C1E5X6	C1EEJ3	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.933
MICPUN_108235	MICPUN_95416	C1E5X6	C1EDU3	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.821
MICPUN_108235	MICPUN_96004	C1E5X6	C1EI97	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Ribos_L4_asso_C domain-containing protein.	0.924
MICPUN_58110	TOR	C1E4P4	C1EJC3	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.695
MICPUN_73028	MICPUN_79901	C1E2G5	C1E2G4	Uncharacterized protein.	HTH La-type RNA-binding domain-containing protein.	0.526
MICPUN_79901	MICPUN_73028	C1E2G4	C1E2G5	HTH La-type RNA-binding domain-containing protein.	Uncharacterized protein.	0.526
MICPUN_80940	BTF3	C1E4C9	C1EBZ4	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Nascent polypeptide-associated complex subunit beta.	0.782
MICPUN_80940	MICPUN_108235	C1E4C9	C1E5X6	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.935
MICPUN_80940	MICPUN_89912	C1E4C9	C1DYY4	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
MICPUN_80940	MICPUN_91267	C1E4C9	C1EAM6	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	KOW domain-containing protein.	0.999
MICPUN_80940	MICPUN_92037	C1E4C9	C1EEJ3	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999

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