105 items (Micromonas commoda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (102 aa)
	rpl14	Ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. (124 aa)
	rps8	Ribosomal protein S8. (128 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (120 aa)
	rps4	Ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family. (239 aa)
	MICPUN_63059	Importin N-terminal domain-containing protein. (1295 aa)
	MICPUN_103521	Methyltransf_12 domain-containing protein. (402 aa)
	MICPUN_107171	Uncharacterized protein. (143 aa)
	MICPUN_87366	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (57 aa)
	MICPUN_63254	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	MICPUN_63313	HTH myb-type domain-containing protein. (769 aa)
	MICPUN_52633	Ribosomal_L28e domain-containing protein. (138 aa)
	MICPUN_107179	Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (519 aa)
	MICPUN_62094	Ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (126 aa)
	MICPUN_91845	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (192 aa)
	MICPUN_85806	Uncharacterized protein. (148 aa)
	MICPUN_61973	NAD(P)-bd_dom domain-containing protein. (171 aa)
	MICPUN_108826	Uncharacterized protein. (108 aa)
	MICPUN_91476	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (144 aa)
	MICPUN_91459	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (233 aa)
	MICPUN_91456	Uncharacterized protein. (133 aa)
	MICPUN_91438	SecY protein. (487 aa)
	MICPUN_94842	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (292 aa)
	MICPUN_97729	Tr-type G domain-containing protein. (463 aa)
	RPS13	Ribosomal protein S13, chloroplast; Belongs to the universal ribosomal protein uS13 family. (176 aa)
	MICPUN_89851	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (385 aa)
	RPL11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (170 aa)
	MICPUN_107597	Uncharacterized protein. (123 aa)
	RPS28E	Uncharacterized protein. (64 aa)
	RPL19	60S ribosomal protein L19. (195 aa)
	MICPUN_55312	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (237 aa)
	MICPUN_93045	Ribosomal_L16 domain-containing protein. (228 aa)
	MICPUN_89585	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (147 aa)
	MICPUN_107532	Uncharacterized protein. (130 aa)
	MICPUN_109630	DUF4101 domain-containing protein. (366 aa)
	RPL37AE	Ribosomal protein L37ae. (92 aa)
	MICPUN_92603	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (264 aa)
	MICPUN_64605	Importin N-terminal domain-containing protein. (1264 aa)
	MICPUN_96004	Ribos_L4_asso_C domain-containing protein. (395 aa)
	MICPUN_95995	Uncharacterized protein. (168 aa)
	MICPUN_109558	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	MICPUN_95986	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (106 aa)
	MICPUN_64167	Ribosomal protein L18. (386 aa)
	RPS18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (145 aa)
	MICPUN_95694	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (215 aa)
	MICPUN_92321	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	EIF	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (717 aa)
	MICPUN_92037	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (128 aa)
	MICPUN_106274	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (107 aa)
	MICPUN_95475	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (263 aa)
	MICPUN_95460	Ribosomal_L2_C domain-containing protein. (261 aa)
	MICPUN_102989	Uncharacterized protein. (216 aa)
	MICPUN_86588	Uncharacterized protein. (115 aa)
	MICPUN_107054	Uncharacterized protein. (135 aa)
	MICPUN_61417	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (306 aa)
	MICPUN_108906	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	MICPUN_91602	Uncharacterized protein. (129 aa)
	EIF2A	S1 motif domain-containing protein. (316 aa)
	MICPUN_61082	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (113 aa)
	MICPUN_76945	Uncharacterized protein. (117 aa)
	MICPUN_108678	Uncharacterized protein. (200 aa)
	MICPUN_91267	KOW domain-containing protein. (144 aa)
	MICPUN_59947	Uncharacterized protein. (220 aa)
	MICPUN_91199	Uncharacterized protein. (110 aa)
	MICPUN_59587	Uncharacterized protein; Belongs to the eIF-3 subunit D family. (531 aa)
	MICPUN_108491	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (428 aa)
	MICPUN_91099	Uncharacterized protein. (56 aa)
	MICPUN_94512	S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (140 aa)
	MICPUN_59166	PCI domain-containing protein. (398 aa)
	MICPUN_82663	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (87 aa)
	MICPUN_90970	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	MICPUN_108364	40S ribosomal protein S27. (86 aa)
	MICPUN_94345	Ribosomal_L7Ae domain-containing protein. (115 aa)
	MICPUN_90856	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (273 aa)
	MICPUN_90851	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (258 aa)
	MICPUN_90780	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (220 aa)
	MICPUN_108235	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (355 aa)
	MICPUN_58347	HTH myb-type domain-containing protein. (376 aa)
	MICPUN_57540	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (188 aa)
	MICPUN_94088	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	MICPUN_108173	Ribosomal_L18_c domain-containing protein. (297 aa)
	MICPUN_81184	Ribosomal protein; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	MICPUN_80940	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (122 aa)
	MICPUN_100023	Ribosomal_S10 domain-containing protein. (150 aa)
	MICPUN_57744	Ribosomal_S10 domain-containing protein. (149 aa)
	MICPUN_99934	Rhomboid domain-containing protein. (303 aa)
	MICPUN_93744	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	MICPUN_93705	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (142 aa)
	MICPUN_56981	Uncharacterized protein. (568 aa)
	MICPUN_56980	Glycosyltransferase family 4 protein. (389 aa)
	MICPUN_90249	S10_plectin domain-containing protein. (147 aa)
	MICPUN_56703	Uncharacterized protein. (230 aa)
	MICPUN_56609	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (317 aa)
	RPL37E	Ribosomal protein L37; Binds to the 23S rRNA. (96 aa)
	MICPUN_90125	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (246 aa)
	MICPUN_107814	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (296 aa)
	MICPUN_56442	Uncharacterized protein. (51 aa)
	MICPUN_90144	Uncharacterized protein. (118 aa)
	MICPUN_78847	eIF2B_5 domain-containing protein. (233 aa)
	MICPUN_93345	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (189 aa)
	MICPUN_89912	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	MICPUN_53957	Ribosomal_L14e domain-containing protein. (130 aa)
	MICPUN_106753	Uncharacterized protein. (413 aa)
	MICPUN_68115	Uncharacterized protein. (399 aa)
	MICPUN_67266	Uncharacterized protein. (407 aa)

Your Current Organism:

Micromonas commoda

NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF	EIF2A	C1EEX2	C1EBZ2	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	S1 motif domain-containing protein.	0.998
EIF	MICPUN_100023	C1EEX2	C1E3T4	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Ribosomal_S10 domain-containing protein.	0.951
EIF	MICPUN_103521	C1EEX2	C1FIX5	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Methyltransf_12 domain-containing protein.	0.433
EIF	MICPUN_106753	C1EEX2	C1DYE3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.855
EIF	MICPUN_107171	C1EEX2	C1FIU6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.984
EIF	MICPUN_107179	C1EEX2	C1FIH6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.997
EIF	MICPUN_107532	C1EEX2	C1FDU2	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.916
EIF	MICPUN_107814	C1EEX2	C1DZS6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.972
EIF	MICPUN_108173	C1EEX2	C1E4X6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Ribosomal_L18_c domain-containing protein.	0.406
EIF	MICPUN_108235	C1EEX2	C1E5X6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.999
EIF	MICPUN_108364	C1EEX2	C1E7I0	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	40S ribosomal protein S27.	0.937
EIF	MICPUN_108491	C1EEX2	C1E8U6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.999
EIF	MICPUN_108678	C1EEX2	C1EB36	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Uncharacterized protein.	0.541
EIF	MICPUN_108906	C1EEX2	C1ECE1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.980
EIF	MICPUN_109558	C1EEX2	C1EI23	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.955
EIF	MICPUN_109630	C1EEX2	C1EJ04	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	DUF4101 domain-containing protein.	0.956
EIF	MICPUN_52633	C1EEX2	C1FII6	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Ribosomal_L28e domain-containing protein.	0.431
EIF	MICPUN_53957	C1EEX2	C1DYW9	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Ribosomal_L14e domain-containing protein.	0.438
EIF	MICPUN_56609	C1EEX2	C1E0R3	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.999
EIF	MICPUN_56980	C1EEX2	C1E1S8	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	Glycosyltransferase family 4 protein.	0.433

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