STRINGSTRING
MICPUN_56635 MICPUN_56635 MICPUN_75899 MICPUN_75899 MICPUN_56475 MICPUN_56475 MICPUN_93665 MICPUN_93665 MICPUN_57417 MICPUN_57417 MICPUN_57440 MICPUN_57440 MICPUN_68623 MICPUN_68623 MICPUN_105511 MICPUN_105511 MICPUN_90428 MICPUN_90428 MICPUN_59230 MICPUN_59230 RFC5 RFC5 MICPUN_61038 MICPUN_61038 MICPUN_75058 MICPUN_75058 MICPUN_95914 MICPUN_95914 RFC2 RFC2 MICPUN_62939 MICPUN_62939
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MICPUN_56635PHD-type domain-containing protein. (1470 aa)
MICPUN_75899UmuC domain-containing protein. (306 aa)
MICPUN_56475BRCT like protein. (855 aa)
MICPUN_93665Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
MICPUN_57417Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (525 aa)
MICPUN_57440Uncharacterized protein. (669 aa)
MICPUN_68623UmuC domain-containing protein. (410 aa)
MICPUN_105511Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (867 aa)
MICPUN_90428Ubiquitin-like domain-containing protein. (152 aa)
MICPUN_59230Replication factor C subunit 1. (917 aa)
RFC5AAA domain-containing protein. (355 aa)
MICPUN_61038AAA domain-containing protein. (355 aa)
MICPUN_75058DNA polymerase. (768 aa)
MICPUN_95914AAA domain-containing protein. (329 aa)
RFC2Replication factor c, subunit 2. (334 aa)
MICPUN_62939HORMA domain-containing protein. (284 aa)
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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