(6 nodes) Mixed, incl. Ribosomal protein L39e, and Ribosomal protein L35Ae, conserved site network (Gossypium raimondii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2M2R1	Ribos_L4_asso_C domain-containing protein. (409 aa)
	A0A0D2NSB2	TRASH domain-containing protein. (164 aa)
	A0A0D2QCA1	Uncharacterized protein. (112 aa)
	A0A0D2R5Y5	Uncharacterized protein. (51 aa)
	A0A0D2RTT1	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (224 aa)
	A0A0D2TCF5	Uncharacterized protein. (121 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2M2R1	A0A0D2NSB2	Ribos_L4_asso_C domain-containing protein.	TRASH domain-containing protein.	0.982
A0A0D2M2R1	A0A0D2QCA1	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.977
A0A0D2M2R1	A0A0D2R5Y5	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.987
A0A0D2M2R1	A0A0D2RTT1	Ribos_L4_asso_C domain-containing protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.985
A0A0D2M2R1	A0A0D2TCF5	Ribos_L4_asso_C domain-containing protein.	Uncharacterized protein.	0.978
A0A0D2NSB2	A0A0D2M2R1	TRASH domain-containing protein.	Ribos_L4_asso_C domain-containing protein.	0.982
A0A0D2NSB2	A0A0D2QCA1	TRASH domain-containing protein.	Uncharacterized protein.	0.986
A0A0D2NSB2	A0A0D2R5Y5	TRASH domain-containing protein.	Uncharacterized protein.	0.990
A0A0D2NSB2	A0A0D2RTT1	TRASH domain-containing protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.986
A0A0D2NSB2	A0A0D2TCF5	TRASH domain-containing protein.	Uncharacterized protein.	0.987
A0A0D2QCA1	A0A0D2M2R1	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.977
A0A0D2QCA1	A0A0D2NSB2	Uncharacterized protein.	TRASH domain-containing protein.	0.986
A0A0D2QCA1	A0A0D2R5Y5	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0D2QCA1	A0A0D2RTT1	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.981
A0A0D2QCA1	A0A0D2TCF5	Uncharacterized protein.	Uncharacterized protein.	0.981
A0A0D2R5Y5	A0A0D2M2R1	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.987
A0A0D2R5Y5	A0A0D2NSB2	Uncharacterized protein.	TRASH domain-containing protein.	0.990
A0A0D2R5Y5	A0A0D2QCA1	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A0D2R5Y5	A0A0D2RTT1	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.989
A0A0D2R5Y5	A0A0D2TCF5	Uncharacterized protein.	Uncharacterized protein.	0.989