28 items (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2USJ4	Uncharacterized protein. (436 aa)
	A0A0D2VLT4	Uncharacterized protein. (350 aa)
	A0A0D2VED8	Uncharacterized protein. (463 aa)
	A0A0D2VEA3	Uncharacterized protein. (182 aa)
	A0A0D2V3P0	Uncharacterized protein. (448 aa)
	A0A0D2UVT1	Uncharacterized protein. (354 aa)
	A0A0D2UTH4	Uncharacterized protein. (437 aa)
	A0A0D2UJN0	Uncharacterized protein. (445 aa)
	A0A0D2UHU0	Uncharacterized protein. (362 aa)
	A0A0D2UHT4	Uncharacterized protein. (343 aa)
	A0A0D2UHQ2	Uncharacterized protein. (423 aa)
	A0A0D2UHP2	Uncharacterized protein. (214 aa)
	A0A0D2UG61	Uncharacterized protein; Belongs to the cytochrome P450 family. (539 aa)
	A0A0D2TK96	Uncharacterized protein. (436 aa)
	A0A0D2T7F1	Uncharacterized protein. (375 aa)
	A0A0D2SXX0	Uncharacterized protein. (429 aa)
	A0A0D2SXW4	Uncharacterized protein. (445 aa)
	A0A0D2SEZ3	Uncharacterized protein. (723 aa)
	A0A0D2RUQ8	Uncharacterized protein. (445 aa)
	A0A0D2RF76	Uncharacterized protein. (675 aa)
	A0A0D2RF12	Uncharacterized protein. (240 aa)
	bHLH064D	Basic helix-loop-helix protein 064D. (685 aa)
	A0A0D2QS79	BHLH domain-containing protein. (661 aa)
	A0A0D2QRE2	Uncharacterized protein. (380 aa)
	A0A0D2QEM7	Uncharacterized protein. (499 aa)
	A0A0D2PTL9	Uncharacterized protein. (271 aa)
	A0A0D2N9K2	Uncharacterized protein. (403 aa)
	A0A0D2MZU2	ANK_REP_REGION domain-containing protein. (171 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D2PTL9	A0A0D2QS79	A0A0D2PTL9	A0A0D2QS79	Uncharacterized protein.	BHLH domain-containing protein.	0.569
A0A0D2PTL9	bHLH064D	A0A0D2PTL9	A0A0D2R1W1	Uncharacterized protein.	Basic helix-loop-helix protein 064D.	0.569
A0A0D2QEM7	A0A0D2SXW4	A0A0D2QEM7	A0A0D2SXW4	Uncharacterized protein.	Uncharacterized protein.	0.659
A0A0D2QEM7	A0A0D2TK96	A0A0D2QEM7	A0A0D2TK96	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A0D2QEM7	A0A0D2UHQ2	A0A0D2QEM7	A0A0D2UHQ2	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A0D2QEM7	A0A0D2UJN0	A0A0D2QEM7	A0A0D2UJN0	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A0D2QEM7	A0A0D2USJ4	A0A0D2QEM7	A0A0D2USJ4	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A0D2QEM7	A0A0D2UTH4	A0A0D2QEM7	A0A0D2UTH4	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A0D2QEM7	A0A0D2VED8	A0A0D2QEM7	A0A0D2VED8	Uncharacterized protein.	Uncharacterized protein.	0.659
A0A0D2QEM7	A0A0D2VLT4	A0A0D2QEM7	A0A0D2VLT4	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A0D2QS79	A0A0D2PTL9	A0A0D2QS79	A0A0D2PTL9	BHLH domain-containing protein.	Uncharacterized protein.	0.569
A0A0D2RF76	A0A0D2SEZ3	A0A0D2RF76	A0A0D2SEZ3	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0D2SEZ3	A0A0D2RF76	A0A0D2SEZ3	A0A0D2RF76	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0D2SXW4	A0A0D2QEM7	A0A0D2SXW4	A0A0D2QEM7	Uncharacterized protein.	Uncharacterized protein.	0.659
A0A0D2SXW4	A0A0D2TK96	A0A0D2SXW4	A0A0D2TK96	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A0D2SXW4	A0A0D2UHQ2	A0A0D2SXW4	A0A0D2UHQ2	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A0D2SXW4	A0A0D2UJN0	A0A0D2SXW4	A0A0D2UJN0	Uncharacterized protein.	Uncharacterized protein.	0.652
A0A0D2SXW4	A0A0D2USJ4	A0A0D2SXW4	A0A0D2USJ4	Uncharacterized protein.	Uncharacterized protein.	0.656
A0A0D2SXW4	A0A0D2UTH4	A0A0D2SXW4	A0A0D2UTH4	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A0D2SXW4	A0A0D2VED8	A0A0D2SXW4	A0A0D2VED8	Uncharacterized protein.	Uncharacterized protein.	0.652