17 items (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2Q454	JmjC domain-containing protein. (484 aa)
	A0A0D2QC96	PCI domain-containing protein. (397 aa)
	A0A0D2N4I9	BZIP domain-containing protein. (169 aa)
	A0A0D2NEH7	Uncharacterized protein. (1370 aa)
	A0A0D2NG71	Uncharacterized protein. (233 aa)
	A0A0D2NH99	F-box domain-containing protein. (641 aa)
	A0A0D2QUC0	F-box domain-containing protein. (329 aa)
	A0A0D2NZS8	Uncharacterized protein. (232 aa)
	A0A0D2PR38	PCI domain-containing protein. (397 aa)
	A0A0D2V882	Uncharacterized protein. (212 aa)
	A0A0D2V068	JmjC domain-containing protein. (508 aa)
	A0A0D2TW60	Uncharacterized protein. (724 aa)
	A0A0D2TW55	PCI domain-containing protein. (400 aa)
	A0A0D2TDL3	Uncharacterized protein. (271 aa)
	A0A0D2T0I2	F-box domain-containing protein. (327 aa)
	A0A0D2R6Z2	UBIQUITIN_CONJUGAT_2 domain-containing protein. (175 aa)
	A0A0D2PZD8	Uncharacterized protein. (336 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2N4I9	A0A0D2NG71	BZIP domain-containing protein.	Uncharacterized protein.	0.417
A0A0D2N4I9	A0A0D2R6Z2	BZIP domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.532
A0A0D2N4I9	A0A0D2V882	BZIP domain-containing protein.	Uncharacterized protein.	0.417
A0A0D2NG71	A0A0D2N4I9	Uncharacterized protein.	BZIP domain-containing protein.	0.417
A0A0D2NZS8	A0A0D2TDL3	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A0D2PZD8	A0A0D2TDL3	Uncharacterized protein.	Uncharacterized protein.	0.812
A0A0D2R6Z2	A0A0D2N4I9	UBIQUITIN_CONJUGAT_2 domain-containing protein.	BZIP domain-containing protein.	0.532
A0A0D2TDL3	A0A0D2NZS8	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A0D2TDL3	A0A0D2PZD8	Uncharacterized protein.	Uncharacterized protein.	0.812
A0A0D2V882	A0A0D2N4I9	Uncharacterized protein.	BZIP domain-containing protein.	0.417