(39 nodes) Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase network (Gossypium raimondii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2S5K8	SER_THR_PHOSPHATASE domain-containing protein. (70 aa)
	A0A0D2MAZ2	Serine/threonine-protein phosphatase. (306 aa)
	A0A0D2MU74	Serine/threonine-protein phosphatase. (891 aa)
	A0A0D2NBX2	Serine/threonine-protein phosphatase. (447 aa)
	A0A0D2P569	Serine/threonine-protein phosphatase. (312 aa)
	A0A0D2PHH3	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (329 aa)
	A0A0D2PNH1	TPR_REGION domain-containing protein. (537 aa)
	A0A0D2PX44	Serine/threonine-protein phosphatase. (303 aa)
	A0A0D2PZ16	Serine/threonine-protein phosphatase. (303 aa)
	A0A0D2QCY2	SER_THR_PHOSPHATASE domain-containing protein. (96 aa)
	A0A0D2QHS5	Serine/threonine-protein phosphatase. (310 aa)
	A0A0D2QNW4	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (308 aa)
	A0A0D2QSL0	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (309 aa)
	A0A0D2R3F5	Metallophos domain-containing protein. (73 aa)
	A0A0D2R9F3	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (326 aa)
	A0A0D2RJ62	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (321 aa)
	A0A0D2RR48	Serine/threonine-protein phosphatase. (312 aa)
	A0A0D2RRI1	Serine/threonine-protein phosphatase. (1013 aa)
	A0A0D2S1A8	Serine/threonine-protein phosphatase. (1015 aa)
	A0A0D2S1Y7	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (334 aa)
	A0A0D2S2N6	Serine/threonine-protein phosphatase. (303 aa)
	A0A0D2SDB3	Serine/threonine-protein phosphatase. (306 aa)
	A0A0D2SGC5	Metallophos domain-containing protein. (306 aa)
	A0A0D2SIG8	Serine/threonine-protein phosphatase. (317 aa)
	A0A0D2SJE8	Serine/threonine-protein phosphatase. (878 aa)
	A0A0D2SM72	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (333 aa)
	A0A0D2SV96	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (318 aa)
	A0A0D2T2Y7	Serine/threonine-protein phosphatase. (306 aa)
	A0A0D2T8A5	Serine/threonine-protein phosphatase. (311 aa)
	A0A0D2TGL2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (308 aa)
	A0A0D2TN80	Serine/threonine-protein phosphatase. (306 aa)
	A0A0D2U1Z6	Serine/threonine-protein phosphatase. (313 aa)
	A0A0D2U206	Serine/threonine-protein phosphatase. (305 aa)
	A0A0D2U2M4	Metallophos domain-containing protein. (302 aa)
	A0A0D2UIF0	Serine/threonine-protein phosphatase. (1016 aa)
	A0A0D2URP1	TPR_REGION domain-containing protein. (485 aa)
	A0A0D2UYL4	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (315 aa)
	A0A0D2VFK5	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (345 aa)
	A0A0D2W981	Serine/threonine-protein phosphatase. (312 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2MAZ2	A0A0D2SIG8	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565
A0A0D2MAZ2	A0A0D2U206	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.564
A0A0D2P569	A0A0D2SIG8	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565
A0A0D2P569	A0A0D2U206	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.564
A0A0D2QCY2	A0A0D2R3F5	SER_THR_PHOSPHATASE domain-containing protein.	Metallophos domain-containing protein.	0.565
A0A0D2QCY2	A0A0D2SIG8	SER_THR_PHOSPHATASE domain-containing protein.	Serine/threonine-protein phosphatase.	0.573
A0A0D2QCY2	A0A0D2U206	SER_THR_PHOSPHATASE domain-containing protein.	Serine/threonine-protein phosphatase.	0.570
A0A0D2QHS5	A0A0D2SIG8	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565
A0A0D2QHS5	A0A0D2U206	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.564
A0A0D2R3F5	A0A0D2QCY2	Metallophos domain-containing protein.	SER_THR_PHOSPHATASE domain-containing protein.	0.565
A0A0D2R3F5	A0A0D2S5K8	Metallophos domain-containing protein.	SER_THR_PHOSPHATASE domain-containing protein.	0.571
A0A0D2RR48	A0A0D2SIG8	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565
A0A0D2RR48	A0A0D2U206	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.564
A0A0D2S5K8	A0A0D2R3F5	SER_THR_PHOSPHATASE domain-containing protein.	Metallophos domain-containing protein.	0.571
A0A0D2S5K8	A0A0D2SIG8	SER_THR_PHOSPHATASE domain-containing protein.	Serine/threonine-protein phosphatase.	0.566
A0A0D2S5K8	A0A0D2U206	SER_THR_PHOSPHATASE domain-containing protein.	Serine/threonine-protein phosphatase.	0.565
A0A0D2SDB3	A0A0D2SIG8	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565
A0A0D2SDB3	A0A0D2U206	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.564
A0A0D2SIG8	A0A0D2MAZ2	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565
A0A0D2SIG8	A0A0D2P569	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.565