46 items (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2M0F2	DNA_MISMATCH_REPAIR_2 domain-containing protein. (119 aa)
	A0A0D2M312	NAC domain-containing protein. (294 aa)
	A0A0D2N6L3	NAC domain-containing protein. (450 aa)
	A0A0D2P1H2	DNA ligase. (804 aa)
	A0A0D2P312	Uncharacterized protein. (287 aa)
	A0A0D2PGQ7	NAC domain-containing protein. (481 aa)
	A0A0D2PL93	NAC domain-containing protein. (444 aa)
	A0A0D2PRV0	NAC domain-containing protein. (501 aa)
	A0A0D2Q0D1	NAC domain-containing protein. (279 aa)
	A0A0D2Q4B6	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (943 aa)
	A0A0D2Q8U4	Uncharacterized protein. (234 aa)
	A0A0D2QIB0	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (626 aa)
	A0A0D2QPM3	NAC domain-containing protein. (635 aa)
	A0A0D2QPX7	XPGN domain-containing protein. (94 aa)
	A0A0D2QQH3	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1315 aa)
	A0A0D2QUM6	NAC domain-containing protein. (402 aa)
	A0A0D2R273	NAC domain-containing protein. (268 aa)
	A0A0D2R3D8	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1069 aa)
	A0A0D2R3M4	NAC domain-containing protein. (483 aa)
	A0A0D2RH30	DNA_MISMATCH_REPAIR_2 domain-containing protein. (142 aa)
	A0A0D2RLE0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	A0A0D2RML1	NAC domain-containing protein. (859 aa)
	A0A0D2RNN5	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1117 aa)
	A0A0D2RV31	Uncharacterized protein. (234 aa)
	A0A0D2RXQ4	Uncharacterized protein. (562 aa)
	A0A0D2S130	NAC domain-containing protein. (371 aa)
	A0A0D2S9D6	NAC domain-containing protein. (319 aa)
	A0A0D2S9J8	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1126 aa)
	A0A0D2SIA8	Uncharacterized protein. (214 aa)
	A0A0D2SJE1	Uncharacterized protein. (122 aa)
	A0A0D2SJY3	NAC domain-containing protein. (254 aa)
	A0A0D2T1S7	Uncharacterized protein. (691 aa)
	A0A0D2T4W1	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (856 aa)
	A0A0D2TDC9	NAC domain-containing protein. (452 aa)
	A0A0D2TLL5	Uncharacterized protein. (164 aa)
	A0A0D2U395	Uncharacterized protein. (967 aa)
	A0A0D2U7B7	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	A0A0D2UIG0	NAC domain-containing protein. (410 aa)
	A0A0D2UP44	Uncharacterized protein. (239 aa)
	A0A0D2UY22	DNA_MISMATCH_REPAIR_2 domain-containing protein. (161 aa)
	A0A0D2V1U0	DNA_MISMATCH_REPAIR_2 domain-containing protein. (604 aa)
	A0A0D2V3C3	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (334 aa)
	A0A0D2VDH0	DNA_mis_repair domain-containing protein. (729 aa)
	A0A0D2VH28	DNA_MISMATCH_REPAIR_2 domain-containing protein. (161 aa)
	A0A0D2VH84	Uncharacterized protein. (116 aa)
	A0A0D2VHE0	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (629 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2M0F2	A0A0D2M312	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2N6L3	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2P1H2	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA ligase.	0.511
A0A0D2M0F2	A0A0D2P312	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.523
A0A0D2M0F2	A0A0D2PGQ7	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2PL93	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2PRV0	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2Q0D1	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2Q4B6	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.950
A0A0D2M0F2	A0A0D2Q8U4	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.523
A0A0D2M0F2	A0A0D2QIB0	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.523
A0A0D2M0F2	A0A0D2QPM3	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2QPX7	DNA_MISMATCH_REPAIR_2 domain-containing protein.	XPGN domain-containing protein.	0.873
A0A0D2M0F2	A0A0D2QUM6	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2R273	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2R3M4	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2RLE0	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.916
A0A0D2M0F2	A0A0D2RML1	DNA_MISMATCH_REPAIR_2 domain-containing protein.	NAC domain-containing protein.	0.523
A0A0D2M0F2	A0A0D2RNN5	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.882
A0A0D2M0F2	A0A0D2RV31	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.523