49 items (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2T4W1	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (856 aa)
	A0A0D2LS10	Ubiquitin-like domain-containing protein. (183 aa)
	A0A0D2LVF7	Uncharacterized protein. (1007 aa)
	A0A0D2M312	NAC domain-containing protein. (294 aa)
	A0A0D2MPP1	AAA domain-containing protein. (332 aa)
	A0A0D2N6L3	NAC domain-containing protein. (450 aa)
	A0A0D2NRX9	Uncharacterized protein. (652 aa)
	A0A0D2P312	Uncharacterized protein. (287 aa)
	A0A0D2P6Z9	Ubiquitin-like domain-containing protein. (131 aa)
	A0A0D2PET7	AAA domain-containing protein. (354 aa)
	A0A0D2PGQ7	NAC domain-containing protein. (481 aa)
	A0A0D2PIM2	HORMA domain-containing protein. (218 aa)
	A0A0D2PL93	NAC domain-containing protein. (444 aa)
	A0A0D2PRV0	NAC domain-containing protein. (501 aa)
	A0A0D2Q0D1	NAC domain-containing protein. (279 aa)
	A0A0D2Q8U4	Uncharacterized protein. (234 aa)
	A0A0D2QIB0	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (626 aa)
	A0A0D2QPM3	NAC domain-containing protein. (635 aa)
	A0A0D2QUM6	NAC domain-containing protein. (402 aa)
	A0A0D2QW02	Uncharacterized protein. (2042 aa)
	A0A0D2R260	Uncharacterized protein. (1216 aa)
	A0A0D2R273	NAC domain-containing protein. (268 aa)
	A0A0D2R3M4	NAC domain-containing protein. (483 aa)
	A0A0D2RAU5	Uncharacterized protein. (711 aa)
	A0A0D2RF05	Uncharacterized protein. (764 aa)
	A0A0D2RLE0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	A0A0D2RML1	NAC domain-containing protein. (859 aa)
	A0A0D2RSP2	AAA domain-containing protein. (1171 aa)
	A0A0D2RV31	Uncharacterized protein. (234 aa)
	A0A0D2S130	NAC domain-containing protein. (371 aa)
	A0A0D2S9D6	NAC domain-containing protein. (319 aa)
	A0A0D2SJY3	NAC domain-containing protein. (254 aa)
	A0A0D2SY88	AAA domain-containing protein. (1146 aa)
	A0A0D2T035	Ubiquitin-like domain-containing protein. (210 aa)
	A0A0D2T1V9	AAA domain-containing protein. (1163 aa)
	A0A0D2VHE0	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (629 aa)
	A0A0D2VG14	AAA domain-containing protein. (354 aa)
	A0A0D2V3C3	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (334 aa)
	A0A0D2UR74	DNA_pol3_gamma3 domain-containing protein. (1326 aa)
	A0A0D2UP44	Uncharacterized protein. (239 aa)
	A0A0D2UMI5	Ubiquitin-like domain-containing protein. (156 aa)
	A0A0D2UIG0	NAC domain-containing protein. (410 aa)
	A0A0D2U9G5	AAA domain-containing protein. (342 aa)
	A0A0D2U7B7	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	A0A0D2TV05	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1134 aa)
	A0A0D2TUX3	AAA domain-containing protein. (363 aa)
	A0A0D2TLL5	Uncharacterized protein. (164 aa)
	A0A0D2TH74	Replication factor C subunit 1. (852 aa)
	A0A0D2TDC9	NAC domain-containing protein. (452 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2LS10	A0A0D2LVF7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.498
A0A0D2LS10	A0A0D2MPP1	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.638
A0A0D2LS10	A0A0D2NRX9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.528
A0A0D2LS10	A0A0D2PET7	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.528
A0A0D2LS10	A0A0D2PIM2	Ubiquitin-like domain-containing protein.	HORMA domain-containing protein.	0.629
A0A0D2LS10	A0A0D2R260	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.626
A0A0D2LS10	A0A0D2RAU5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.528
A0A0D2LS10	A0A0D2RF05	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.528
A0A0D2LS10	A0A0D2RLE0	Ubiquitin-like domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.897
A0A0D2LS10	A0A0D2RSP2	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.498
A0A0D2LS10	A0A0D2SY88	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.498
A0A0D2LS10	A0A0D2T1V9	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.498
A0A0D2LS10	A0A0D2TH74	Ubiquitin-like domain-containing protein.	Replication factor C subunit 1.	0.626
A0A0D2LS10	A0A0D2TUX3	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.638
A0A0D2LS10	A0A0D2TV05	Ubiquitin-like domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.922
A0A0D2LS10	A0A0D2U7B7	Ubiquitin-like domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.897
A0A0D2LS10	A0A0D2U9G5	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.498
A0A0D2LS10	A0A0D2UR74	Ubiquitin-like domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.498
A0A0D2LS10	A0A0D2V3C3	Ubiquitin-like domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.897
A0A0D2LS10	A0A0D2VG14	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.528