41 items (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2LUX2	Uncharacterized protein. (223 aa)
	A0A0D2M703	Uncharacterized protein. (536 aa)
	A0A0D2MPP1	AAA domain-containing protein. (332 aa)
	A0A0D2NRX9	Uncharacterized protein. (652 aa)
	A0A0D2P1H2	DNA ligase. (804 aa)
	A0A0D2PET7	AAA domain-containing protein. (354 aa)
	A0A0D2Q4B6	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (943 aa)
	A0A0D2QDJ9	Uncharacterized protein. (1184 aa)
	A0A0D2QQH3	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1315 aa)
	A0A0D2QSS1	Uncharacterized protein. (199 aa)
	A0A0D2R2Q4	Uncharacterized protein. (87 aa)
	A0A0D2R3D8	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1069 aa)
	A0A0D2RAU5	Uncharacterized protein. (711 aa)
	A0A0D2RDR4	Uncharacterized protein. (158 aa)
	A0A0D2RF05	Uncharacterized protein. (764 aa)
	A0A0D2RHC4	Uncharacterized protein. (136 aa)
	A0A0D2RLE0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	A0A0D2RNN5	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1117 aa)
	A0A0D2RRH3	RPA_C domain-containing protein. (283 aa)
	A0A0D2RXQ4	Uncharacterized protein. (562 aa)
	A0A0D2S2M4	Uncharacterized protein. (161 aa)
	A0A0D2SFT5	DNA ligase. (1406 aa)
	A0A0D2SHR7	Uncharacterized protein. (282 aa)
	A0A0D2SJE1	Uncharacterized protein. (122 aa)
	A0A0D2T1C5	Smr domain-containing protein. (927 aa)
	A0A0D2T1S7	Uncharacterized protein. (691 aa)
	A0A0D2T4W1	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (856 aa)
	A0A0D2T6W1	Uncharacterized protein. (136 aa)
	A0A0D2TF08	Uncharacterized protein. (328 aa)
	A0A0D2TH74	Replication factor C subunit 1. (852 aa)
	A0A0D2TSI2	Uncharacterized protein. (106 aa)
	A0A0D2TUX3	AAA domain-containing protein. (363 aa)
	A0A0D2U395	Uncharacterized protein. (967 aa)
	A0A0D2U7B7	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	A0A0D2U9G5	AAA domain-containing protein. (342 aa)
	A0A0D2UZ40	Uncharacterized protein. (533 aa)
	A0A0D2V4K0	Uncharacterized protein. (290 aa)
	A0A0D2VDH0	DNA_mis_repair domain-containing protein. (729 aa)
	A0A0D2VG14	AAA domain-containing protein. (354 aa)
	A0A0D2VG53	DNA polymerase. (1097 aa)
	A0A0D2VH84	Uncharacterized protein. (116 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2LUX2	A0A0D2RLE0	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.530
A0A0D2LUX2	A0A0D2T4W1	Uncharacterized protein.	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.	0.547
A0A0D2LUX2	A0A0D2TSI2	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A0D2LUX2	A0A0D2U395	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A0D2LUX2	A0A0D2U7B7	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.530
A0A0D2M703	A0A0D2MPP1	Uncharacterized protein.	AAA domain-containing protein.	0.418
A0A0D2M703	A0A0D2RLE0	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.490
A0A0D2M703	A0A0D2SJE1	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0D2M703	A0A0D2TUX3	Uncharacterized protein.	AAA domain-containing protein.	0.430
A0A0D2M703	A0A0D2U7B7	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.490
A0A0D2M703	A0A0D2UZ40	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0D2M703	A0A0D2V4K0	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A0D2M703	A0A0D2VG53	Uncharacterized protein.	DNA polymerase.	0.972
A0A0D2M703	A0A0D2VH84	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0D2MPP1	A0A0D2M703	AAA domain-containing protein.	Uncharacterized protein.	0.418
A0A0D2MPP1	A0A0D2NRX9	AAA domain-containing protein.	Uncharacterized protein.	0.977
A0A0D2MPP1	A0A0D2P1H2	AAA domain-containing protein.	DNA ligase.	0.843
A0A0D2MPP1	A0A0D2PET7	AAA domain-containing protein.	AAA domain-containing protein.	0.977
A0A0D2MPP1	A0A0D2Q4B6	AAA domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.523
A0A0D2MPP1	A0A0D2QQH3	AAA domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.466