STRINGSTRING
VITISV_031803 VITISV_031803 VITISV_006937 VITISV_006937 VITISV_014018 VITISV_014018 VITISV_000039 VITISV_000039 D7SIP4_VITVI D7SIP4_VITVI D7SLZ8_VITVI D7SLZ8_VITVI D7SNW0_VITVI D7SNW0_VITVI D7SXN9_VITVI D7SXN9_VITVI D7SXQ2_VITVI D7SXQ2_VITVI D7SYG0_VITVI D7SYG0_VITVI D7SYJ7_VITVI D7SYJ7_VITVI D7T529_VITVI D7T529_VITVI D7T7M5_VITVI D7T7M5_VITVI D7T9Q5_VITVI D7T9Q5_VITVI D7TAF5_VITVI D7TAF5_VITVI D7TAP9_VITVI D7TAP9_VITVI D7TCU3_VITVI D7TCU3_VITVI D7TFL2_VITVI D7TFL2_VITVI D7TK30_VITVI D7TK30_VITVI D7TMR3_VITVI D7TMR3_VITVI D7TN97_VITVI D7TN97_VITVI D7TQB7_VITVI D7TQB7_VITVI D7TS99_VITVI D7TS99_VITVI D7TVE8_VITVI D7TVE8_VITVI D7TW50_VITVI D7TW50_VITVI MCM7 MCM7 D7U557_VITVI D7U557_VITVI MCM4 MCM4 D7U7R5_VITVI D7U7R5_VITVI D7U8I2_VITVI D7U8I2_VITVI D7U9W0_VITVI D7U9W0_VITVI E0CP80_VITVI E0CP80_VITVI E0CR30_VITVI E0CR30_VITVI E0CR43_VITVI E0CR43_VITVI E0CR76_VITVI E0CR76_VITVI E0CUN0_VITVI E0CUN0_VITVI E0CUN2_VITVI E0CUN2_VITVI E0CUN4_VITVI E0CUN4_VITVI F6GSP8_VITVI F6GSP8_VITVI F6GTF5_VITVI F6GTF5_VITVI F6GTM8_VITVI F6GTM8_VITVI F6GU49_VITVI F6GU49_VITVI F6GUM9_VITVI F6GUM9_VITVI F6GUT4_VITVI F6GUT4_VITVI F6GUV3_VITVI F6GUV3_VITVI F6GVH5_VITVI F6GVH5_VITVI F6GW32_VITVI F6GW32_VITVI F6GWV3_VITVI F6GWV3_VITVI F6H0S3_VITVI F6H0S3_VITVI F6H4J7_VITVI F6H4J7_VITVI F6H4T8_VITVI F6H4T8_VITVI F6H6A4_VITVI F6H6A4_VITVI F6H6I1_VITVI F6H6I1_VITVI F6H6I2_VITVI F6H6I2_VITVI F6H6X2_VITVI F6H6X2_VITVI F6HAC8_VITVI F6HAC8_VITVI F6HAE2_VITVI F6HAE2_VITVI F6HC50_VITVI F6HC50_VITVI F6HDD4_VITVI F6HDD4_VITVI F6HE82_VITVI F6HE82_VITVI F6HE83_VITVI F6HE83_VITVI F6HEC7_VITVI F6HEC7_VITVI F6HFL3_VITVI F6HFL3_VITVI MCM6 MCM6 F6HJZ1_VITVI F6HJZ1_VITVI F6HLJ1_VITVI F6HLJ1_VITVI F6HMC0_VITVI F6HMC0_VITVI F6HNZ8_VITVI F6HNZ8_VITVI F6HQU8_VITVI F6HQU8_VITVI F6HT79_VITVI F6HT79_VITVI F6HXA6_VITVI F6HXA6_VITVI F6HXA7_VITVI F6HXA7_VITVI F6HZ12_VITVI F6HZ12_VITVI F6HZ13_VITVI F6HZ13_VITVI F6HZH9_VITVI F6HZH9_VITVI F6I051_VITVI F6I051_VITVI F6I054_VITVI F6I054_VITVI F6I0I4_VITVI F6I0I4_VITVI F6I1E3_VITVI F6I1E3_VITVI F6I2C7_VITVI F6I2C7_VITVI FEN1 FEN1 F6I5I1_VITVI F6I5I1_VITVI F6I657_VITVI F6I657_VITVI F6I753_VITVI F6I753_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_031803Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
VITISV_006937Sld5 domain-containing protein. (186 aa)
VITISV_014018Checkpoint protein; Belongs to the HUS1 family. (323 aa)
VITISV_000039Uncharacterized protein. (244 aa)
D7SIP4_VITVIDNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
D7SLZ8_VITVIProtein kinase domain-containing protein. (516 aa)
D7SNW0_VITVIUncharacterized protein. (605 aa)
D7SXN9_VITVIUncharacterized protein. (673 aa)
D7SXQ2_VITVIUmuC domain-containing protein. (704 aa)
D7SYG0_VITVIUncharacterized protein. (97 aa)
D7SYJ7_VITVIDNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (220 aa)
D7T529_VITVIDNA helicase; Belongs to the MCM family. (732 aa)
D7T7M5_VITVIDNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (210 aa)
D7T9Q5_VITVIUmuC domain-containing protein. (773 aa)
D7TAF5_VITVICCHC-type domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (291 aa)
D7TAP9_VITVIDNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (623 aa)
D7TCU3_VITVICBFD_NFYB_HMF domain-containing protein. (193 aa)
D7TFL2_VITVIDNA helicase; Belongs to the MCM family. (954 aa)
D7TK30_VITVIDNA helicase; Belongs to the MCM family. (776 aa)
D7TMR3_VITVIUncharacterized protein. (140 aa)
D7TN97_VITVIUncharacterized protein. (288 aa)
D7TQB7_VITVIUncharacterized protein. (365 aa)
D7TS99_VITVIUncharacterized protein. (452 aa)
D7TVE8_VITVIDNA primase; Belongs to the eukaryotic-type primase small subunit family. (447 aa)
D7TW50_VITVIAAA domain-containing protein. (330 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
D7U557_VITVIZf-primase domain-containing protein. (339 aa)
MCM4DNA helicase; Belongs to the MCM family. (834 aa)
D7U7R5_VITVIUncharacterized protein. (667 aa)
D7U8I2_VITVIAAA domain-containing protein. (354 aa)
D7U9W0_VITVIUncharacterized protein; Belongs to the rad9 family. (447 aa)
E0CP80_VITVIUncharacterized protein. (315 aa)
E0CR30_VITVIAAA domain-containing protein. (341 aa)
E0CR43_VITVIAAA domain-containing protein. (360 aa)
E0CR76_VITVIUncharacterized protein. (394 aa)
E0CUN0_VITVIUncharacterized protein. (345 aa)
E0CUN2_VITVITIMELESS_C domain-containing protein. (297 aa)
E0CUN4_VITVITIMELESS_C domain-containing protein. (120 aa)
F6GSP8_VITVIAAA_16 domain-containing protein. (540 aa)
F6GTF5_VITVIWD_REPEATS_REGION domain-containing protein. (941 aa)
F6GTM8_VITVIAAA domain-containing protein. (894 aa)
F6GU49_VITVIOrigin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (908 aa)
F6GUM9_VITVIOrigin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (646 aa)
F6GUT4_VITVICell division control protein; Belongs to the CDC6/cdc18 family. (504 aa)
F6GUV3_VITVIProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (300 aa)
F6GVH5_VITVIUncharacterized protein. (397 aa)
F6GW32_VITVIDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2401 aa)
F6GWV3_VITVIUncharacterized protein. (669 aa)
F6H0S3_VITVIUncharacterized protein. (872 aa)
F6H4J7_VITVIDNA polymerase. (1522 aa)
F6H4T8_VITVIHORMA domain-containing protein. (184 aa)
F6H6A4_VITVIDNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1175 aa)
F6H6I1_VITVITIMELESS domain-containing protein. (139 aa)
F6H6I2_VITVIUncharacterized protein. (1143 aa)
F6H6X2_VITVIDNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (182 aa)
F6HAC8_VITVIReplication factor C subunit 1. (864 aa)
F6HAE2_VITVIMCM domain-containing protein. (47 aa)
F6HC50_VITVIUncharacterized protein. (596 aa)
F6HDD4_VITVIFAT domain-containing protein. (82 aa)
F6HE82_VITVICDT1 domain-containing protein. (365 aa)
F6HE83_VITVICDT1_C domain-containing protein. (141 aa)
F6HEC7_VITVIORC_WH_C domain-containing protein. (371 aa)
F6HFL3_VITVIOrigin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (456 aa)
MCM6DNA helicase; Belongs to the MCM family. (808 aa)
F6HJZ1_VITVIAAA domain-containing protein. (1274 aa)
F6HLJ1_VITVIUncharacterized protein. (442 aa)
F6HMC0_VITVIAAA domain-containing protein. (1142 aa)
F6HNZ8_VITVIUncharacterized protein. (592 aa)
F6HQU8_VITVIMCM domain-containing protein; Belongs to the MCM family. (730 aa)
F6HT79_VITVIUncharacterized protein. (260 aa)
F6HXA6_VITVIUncharacterized protein. (56 aa)
F6HXA7_VITVIUncharacterized protein. (86 aa)
F6HZ12_VITVIUncharacterized protein. (226 aa)
F6HZ13_VITVIDNA polymerase. (888 aa)
F6HZH9_VITVICDT1 domain-containing protein. (577 aa)
F6I051_VITVIMCM_lid domain-containing protein. (154 aa)
F6I054_VITVIMCM domain-containing protein; Belongs to the MCM family. (462 aa)
F6I0I4_VITVIProtein kinase domain-containing protein. (260 aa)
F6I1E3_VITVIUncharacterized protein. (548 aa)
F6I2C7_VITVIProtein kinase domain-containing protein. (553 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (384 aa)
F6I5I1_VITVIUncharacterized protein. (170 aa)
F6I657_VITVIUncharacterized protein. (425 aa)
F6I753_VITVIOrigin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (157 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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