STRINGSTRING
VITISV_010341 VITISV_010341 VITISV_002271 VITISV_002271 D7SN90_VITVI D7SN90_VITVI D7TGP5_VITVI D7TGP5_VITVI D7TXE6_VITVI D7TXE6_VITVI F6GU90_VITVI F6GU90_VITVI F6GV39_VITVI F6GV39_VITVI F6HCX1_VITVI F6HCX1_VITVI F6HDI3_VITVI F6HDI3_VITVI F6HDI4_VITVI F6HDI4_VITVI F6HK22_VITVI F6HK22_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_010341Histone H3; Belongs to the histone H3 family. (136 aa)
VITISV_002271Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
D7SN90_VITVIHistone domain-containing protein; Belongs to the histone H2B family. (216 aa)
D7TGP5_VITVIPlus3 domain-containing protein. (819 aa)
D7TXE6_VITVIUncharacterized protein. (458 aa)
F6GU90_VITVIUncharacterized protein. (473 aa)
F6GV39_VITVIHistone H2B; Belongs to the histone H2B family. (148 aa)
F6HCX1_VITVIHistone H2A; Belongs to the histone H2A family. (133 aa)
F6HDI3_VITVIUncharacterized protein. (801 aa)
F6HDI4_VITVIUncharacterized protein. (2674 aa)
F6HK22_VITVIPlus3 domain-containing protein. (377 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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