STRINGSTRING
VITISV_042447 VITISV_042447 D7TNE2_VITVI D7TNE2_VITVI D7U111_VITVI D7U111_VITVI D7U9X3_VITVI D7U9X3_VITVI F6HZC5_VITVI F6HZC5_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_042447Pectate lyase. (439 aa)
D7TNE2_VITVIPectate lyase. (443 aa)
D7U111_VITVIUncharacterized protein. (404 aa)
D7U9X3_VITVIPMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family. (769 aa)
F6HZC5_VITVIPectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. (332 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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