5 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6HAQ1_VITVI	MADS-box domain-containing protein. (79 aa)
	F6HPP5_VITVI	Uncharacterized protein. (371 aa)
	F6HUJ0_VITVI	Uncharacterized protein. (214 aa)
	F6I131_VITVI	Uncharacterized protein. (390 aa)
	F6I3X0_VITVI	Uncharacterized protein. (151 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6HAQ1_VITVI	F6HPP5_VITVI	F6HAQ1	F6HPP5	MADS-box domain-containing protein.	Uncharacterized protein.	0.658
F6HAQ1_VITVI	F6HUJ0_VITVI	F6HAQ1	F6HUJ0	MADS-box domain-containing protein.	Uncharacterized protein.	0.666
F6HAQ1_VITVI	F6I131_VITVI	F6HAQ1	F6I131	MADS-box domain-containing protein.	Uncharacterized protein.	0.669
F6HAQ1_VITVI	F6I3X0_VITVI	F6HAQ1	F6I3X0	MADS-box domain-containing protein.	Uncharacterized protein.	0.422
F6HPP5_VITVI	F6HAQ1_VITVI	F6HPP5	F6HAQ1	Uncharacterized protein.	MADS-box domain-containing protein.	0.658
F6HPP5_VITVI	F6HUJ0_VITVI	F6HPP5	F6HUJ0	Uncharacterized protein.	Uncharacterized protein.	0.667
F6HPP5_VITVI	F6I131_VITVI	F6HPP5	F6I131	Uncharacterized protein.	Uncharacterized protein.	0.667
F6HPP5_VITVI	F6I3X0_VITVI	F6HPP5	F6I3X0	Uncharacterized protein.	Uncharacterized protein.	0.658
F6HUJ0_VITVI	F6HAQ1_VITVI	F6HUJ0	F6HAQ1	Uncharacterized protein.	MADS-box domain-containing protein.	0.666
F6HUJ0_VITVI	F6HPP5_VITVI	F6HUJ0	F6HPP5	Uncharacterized protein.	Uncharacterized protein.	0.667
F6HUJ0_VITVI	F6I131_VITVI	F6HUJ0	F6I131	Uncharacterized protein.	Uncharacterized protein.	0.660
F6HUJ0_VITVI	F6I3X0_VITVI	F6HUJ0	F6I3X0	Uncharacterized protein.	Uncharacterized protein.	0.658
F6I131_VITVI	F6HAQ1_VITVI	F6I131	F6HAQ1	Uncharacterized protein.	MADS-box domain-containing protein.	0.669
F6I131_VITVI	F6HPP5_VITVI	F6I131	F6HPP5	Uncharacterized protein.	Uncharacterized protein.	0.667
F6I131_VITVI	F6HUJ0_VITVI	F6I131	F6HUJ0	Uncharacterized protein.	Uncharacterized protein.	0.660
F6I131_VITVI	F6I3X0_VITVI	F6I131	F6I3X0	Uncharacterized protein.	Uncharacterized protein.	0.422
F6I3X0_VITVI	F6HAQ1_VITVI	F6I3X0	F6HAQ1	Uncharacterized protein.	MADS-box domain-containing protein.	0.422
F6I3X0_VITVI	F6HPP5_VITVI	F6I3X0	F6HPP5	Uncharacterized protein.	Uncharacterized protein.	0.658
F6I3X0_VITVI	F6HUJ0_VITVI	F6I3X0	F6HUJ0	Uncharacterized protein.	Uncharacterized protein.	0.658
F6I3X0_VITVI	F6I131_VITVI	F6I3X0	F6I131	Uncharacterized protein.	Uncharacterized protein.	0.422