(5 nodes) Mixed, incl. PeBoW complex, and NLE (NUC135) domain network (Vitis vinifera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	D7SVC1_VITVI	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (438 aa)
	D7T050_VITVI	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
	D7TPA8_VITVI	G domain-containing protein. (367 aa)
	D7TTT7_VITVI	WD_REPEATS_REGION domain-containing protein. (421 aa)
	D7TWJ6_VITVI	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (607 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SVC1_VITVI	D7T050_VITVI	D7SVC1	D7T050	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.993
D7SVC1_VITVI	D7TPA8_VITVI	D7SVC1	D7TPA8	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	G domain-containing protein.	0.990
D7SVC1_VITVI	D7TTT7_VITVI	D7SVC1	D7TTT7	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	WD_REPEATS_REGION domain-containing protein.	0.994
D7SVC1_VITVI	D7TWJ6_VITVI	D7SVC1	D7TWJ6	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.999
D7T050_VITVI	D7SVC1_VITVI	D7T050	D7SVC1	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.993
D7T050_VITVI	D7TPA8_VITVI	D7T050	D7TPA8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	G domain-containing protein.	0.991
D7T050_VITVI	D7TTT7_VITVI	D7T050	D7TTT7	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	WD_REPEATS_REGION domain-containing protein.	0.993
D7T050_VITVI	D7TWJ6_VITVI	D7T050	D7TWJ6	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.998
D7TPA8_VITVI	D7SVC1_VITVI	D7TPA8	D7SVC1	G domain-containing protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.990
D7TPA8_VITVI	D7T050_VITVI	D7TPA8	D7T050	G domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.991
D7TPA8_VITVI	D7TTT7_VITVI	D7TPA8	D7TTT7	G domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.965
D7TPA8_VITVI	D7TWJ6_VITVI	D7TPA8	D7TWJ6	G domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.996
D7TTT7_VITVI	D7SVC1_VITVI	D7TTT7	D7SVC1	WD_REPEATS_REGION domain-containing protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.994
D7TTT7_VITVI	D7T050_VITVI	D7TTT7	D7T050	WD_REPEATS_REGION domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.993
D7TTT7_VITVI	D7TPA8_VITVI	D7TTT7	D7TPA8	WD_REPEATS_REGION domain-containing protein.	G domain-containing protein.	0.965
D7TTT7_VITVI	D7TWJ6_VITVI	D7TTT7	D7TWJ6	WD_REPEATS_REGION domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.994
D7TWJ6_VITVI	D7SVC1_VITVI	D7TWJ6	D7SVC1	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.999
D7TWJ6_VITVI	D7T050_VITVI	D7TWJ6	D7T050	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.998
D7TWJ6_VITVI	D7TPA8_VITVI	D7TWJ6	D7TPA8	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	G domain-containing protein.	0.996
D7TWJ6_VITVI	D7TTT7_VITVI	D7TWJ6	D7TTT7	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	WD_REPEATS_REGION domain-containing protein.	0.994