(16 nodes) Cytosolic tRNA aminoacylation network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7SM09_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (790 aa)
	D7SRQ8_VITVI	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (804 aa)
	D7T929_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (791 aa)
	D7TTM6_VITVI	tRNA-synt_1g domain-containing protein. (157 aa)
	D7TUY0_VITVI	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (217 aa)
	D7U2U2_VITVI	AA_TRNA_LIGASE_II domain-containing protein. (516 aa)
	E0CP72_VITVI	tRNA-synt_1g domain-containing protein. (43 aa)
	E0CUX2_VITVI	AA_TRNA_LIGASE_II domain-containing protein. (448 aa)
	F6GWJ1_VITVI	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (807 aa)
	F6HDF8_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1094 aa)
	F6HGX8_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (637 aa)
	F6HK37_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1085 aa)
	F6HN51_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1088 aa)
	F6HYL2_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (975 aa)
	F6HYQ5_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1183 aa)
	F6I4J3_VITVI	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (736 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SM09_VITVI	D7SRQ8_VITVI	D7SM09	D7SRQ8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.992
D7SM09_VITVI	D7T929_VITVI	D7SM09	D7T929	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.900
D7SM09_VITVI	D7TTM6_VITVI	D7SM09	D7TTM6	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1g domain-containing protein.	0.992
D7SM09_VITVI	D7TUY0_VITVI	D7SM09	D7TUY0	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.992
D7SM09_VITVI	D7U2U2_VITVI	D7SM09	D7U2U2	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.989
D7SM09_VITVI	E0CP72_VITVI	D7SM09	E0CP72	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1g domain-containing protein.	0.992
D7SM09_VITVI	E0CUX2_VITVI	D7SM09	E0CUX2	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.989
D7SM09_VITVI	F6GWJ1_VITVI	D7SM09	F6GWJ1	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.992
D7SM09_VITVI	F6HDF8_VITVI	D7SM09	F6HDF8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.883
D7SM09_VITVI	F6HGX8_VITVI	D7SM09	F6HGX8	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.911
D7SM09_VITVI	F6HK37_VITVI	D7SM09	F6HK37	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.860
D7SM09_VITVI	F6HN51_VITVI	D7SM09	F6HN51	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.860
D7SM09_VITVI	F6HYL2_VITVI	D7SM09	F6HYL2	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.911
D7SM09_VITVI	F6HYQ5_VITVI	D7SM09	F6HYQ5	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.972
D7SM09_VITVI	F6I4J3_VITVI	D7SM09	F6I4J3	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.965
D7SRQ8_VITVI	D7SM09_VITVI	D7SRQ8	D7SM09	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.992
D7SRQ8_VITVI	D7T929_VITVI	D7SRQ8	D7T929	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.992
D7SRQ8_VITVI	D7TTM6_VITVI	D7SRQ8	D7TTM6	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1g domain-containing protein.	0.980
D7SRQ8_VITVI	D7TUY0_VITVI	D7SRQ8	D7TUY0	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.990
D7SRQ8_VITVI	D7U2U2_VITVI	D7SRQ8	D7U2U2	tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.997