(5 nodes) Mixed, incl. Maturase MatK, and Recycling endosome membrane network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7SXY8_VITVI	Uncharacterized protein. (80 aa)
	D7TN35_VITVI	Intron_maturas2 domain-containing protein. (81 aa)
	F6GVI1_VITVI	SQHop_cyclase_N domain-containing protein. (165 aa)
	F6GYK0_VITVI	Uncharacterized protein. (198 aa)
	F6H582_VITVI	Uncharacterized protein. (32 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SXY8_VITVI	D7TN35_VITVI	D7SXY8	D7TN35	Uncharacterized protein.	Intron_maturas2 domain-containing protein.	0.658
D7SXY8_VITVI	F6GVI1_VITVI	D7SXY8	F6GVI1	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.658
D7SXY8_VITVI	F6H582_VITVI	D7SXY8	F6H582	Uncharacterized protein.	Uncharacterized protein.	0.658
D7TN35_VITVI	D7SXY8_VITVI	D7TN35	D7SXY8	Intron_maturas2 domain-containing protein.	Uncharacterized protein.	0.658
D7TN35_VITVI	F6GVI1_VITVI	D7TN35	F6GVI1	Intron_maturas2 domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.658
D7TN35_VITVI	F6GYK0_VITVI	D7TN35	F6GYK0	Intron_maturas2 domain-containing protein.	Uncharacterized protein.	0.422
D7TN35_VITVI	F6H582_VITVI	D7TN35	F6H582	Intron_maturas2 domain-containing protein.	Uncharacterized protein.	0.422
F6GVI1_VITVI	D7SXY8_VITVI	F6GVI1	D7SXY8	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.658
F6GVI1_VITVI	D7TN35_VITVI	F6GVI1	D7TN35	SQHop_cyclase_N domain-containing protein.	Intron_maturas2 domain-containing protein.	0.658
F6GVI1_VITVI	F6GYK0_VITVI	F6GVI1	F6GYK0	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.770
F6GVI1_VITVI	F6H582_VITVI	F6GVI1	F6H582	SQHop_cyclase_N domain-containing protein.	Uncharacterized protein.	0.667
F6GYK0_VITVI	D7TN35_VITVI	F6GYK0	D7TN35	Uncharacterized protein.	Intron_maturas2 domain-containing protein.	0.422
F6GYK0_VITVI	F6GVI1_VITVI	F6GYK0	F6GVI1	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.770
F6GYK0_VITVI	F6H582_VITVI	F6GYK0	F6H582	Uncharacterized protein.	Uncharacterized protein.	0.667
F6H582_VITVI	D7SXY8_VITVI	F6H582	D7SXY8	Uncharacterized protein.	Uncharacterized protein.	0.658
F6H582_VITVI	D7TN35_VITVI	F6H582	D7TN35	Uncharacterized protein.	Intron_maturas2 domain-containing protein.	0.422
F6H582_VITVI	F6GVI1_VITVI	F6H582	F6GVI1	Uncharacterized protein.	SQHop_cyclase_N domain-containing protein.	0.667
F6H582_VITVI	F6GYK0_VITVI	F6H582	F6GYK0	Uncharacterized protein.	Uncharacterized protein.	0.667