STRINGSTRING
VITISV_026937 VITISV_026937 D7SH16_VITVI D7SH16_VITVI D7SM89_VITVI D7SM89_VITVI D7TPY5_VITVI D7TPY5_VITVI D7U3Y5_VITVI D7U3Y5_VITVI E0CTB2_VITVI E0CTB2_VITVI F6GVH8_VITVI F6GVH8_VITVI F6GWY7_VITVI F6GWY7_VITVI F6H149_VITVI F6H149_VITVI F6H874_VITVI F6H874_VITVI F6HJF1_VITVI F6HJF1_VITVI F6HJF2_VITVI F6HJF2_VITVI F6HJF6_VITVI F6HJF6_VITVI F6HRH2_VITVI F6HRH2_VITVI F6HY18_VITVI F6HY18_VITVI F6I154_VITVI F6I154_VITVI F6I1U8_VITVI F6I1U8_VITVI F6I5E6_VITVI F6I5E6_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_026937ML domain-containing protein. (154 aa)
D7SH16_VITVIHVA22-like protein. (141 aa)
D7SM89_VITVIGB1/RHD3-type G domain-containing protein. (313 aa)
D7TPY5_VITVIHVA22-like protein. (214 aa)
D7U3Y5_VITVIZinc_ribbon_10 domain-containing protein. (429 aa)
E0CTB2_VITVIGB1/RHD3-type G domain-containing protein. (112 aa)
F6GVH8_VITVIUncharacterized protein. (434 aa)
F6GWY7_VITVIHVA22-like protein. (195 aa)
F6H149_VITVIRNase H domain-containing protein. (431 aa)
F6H874_VITVIZinc_ribbon_10 domain-containing protein. (262 aa)
F6HJF1_VITVIUncharacterized protein. (556 aa)
F6HJF2_VITVIHVA22-like protein. (380 aa)
F6HJF6_VITVIHVA22-like protein. (396 aa)
F6HRH2_VITVIZinc_ribbon_10 domain-containing protein. (401 aa)
F6HY18_VITVIProtein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. (813 aa)
F6I154_VITVIHVA22-like protein. (226 aa)
F6I1U8_VITVIUncharacterized protein. (656 aa)
F6I5E6_VITVIUncharacterized protein. (138 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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