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rbcL rbcL rps19 rps19 VITISV_020089 VITISV_020089 VITISV_022329 VITISV_022329 rpl32 rpl32 D7SQB3_VITVI D7SQB3_VITVI D7TB61_VITVI D7TB61_VITVI D7TKZ3_VITVI D7TKZ3_VITVI F6GXR5_VITVI F6GXR5_VITVI PsbN PsbN F6HCV4_VITVI F6HCV4_VITVI F6HIK5_VITVI F6HIK5_VITVI F6HQF8_VITVI F6HQF8_VITVI F6HTI7_VITVI F6HTI7_VITVI F6HWY6_VITVI F6HWY6_VITVI F6I3K1_VITVI F6I3K1_VITVI rbcL-2 rbcL-2 rpl23-A rpl23-A ycf2-A ycf2-A TIC214 TIC214 rpl32-2 rpl32-2 petD petD petB petB psbN psbN rpl33 rpl33 petG petG petA petA cemA cemA ycf4 ycf4 ycf3 ycf3 petN petN rpoB rpoB rpoC1 rpoC1 rpoC2 rpoC2 matK matK petL petL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbcLRuBisCo large subunit. (475 aa)
rps19Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (94 aa)
VITISV_020089Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (228 aa)
VITISV_022329Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (180 aa)
rpl32Ribosomal protein L32. (57 aa)
D7SQB3_VITVIRibulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. (169 aa)
D7TB61_VITVIApocytochr_F_N domain-containing protein. (121 aa)
D7TKZ3_VITVIUncharacterized protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake. (224 aa)
F6GXR5_VITVICytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (226 aa)
PsbNProtein PsbN; May play a role in photosystem I and II biogenesis. (43 aa)
F6HCV4_VITVIUncharacterized protein. (335 aa)
F6HIK5_VITVIUncharacterized protein. (121 aa)
F6HQF8_VITVIUncharacterized protein. (1171 aa)
F6HTI7_VITVICytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (194 aa)
F6HWY6_VITVIUncharacterized protein. (171 aa)
F6I3K1_VITVIUncharacterized protein. (50 aa)
rbcL-2Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (475 aa)
rpl23-A50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. (93 aa)
ycf2-AProtein Ycf2; Probable ATPase of unknown function. Its presence in a non- photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis; Belongs to the Ycf2 family. (2300 aa)
TIC214Protein TIC 214; Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein- conducting channel at the inner envelope. (1893 aa)
rpl32-250S ribosomal protein L32, chloroplastic. (57 aa)
petDCytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa)
petBCytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
psbNProtein PsbN; May play a role in photosystem I and II biogenesis. Belongs to the PsbN family. (43 aa)
rpl3350S ribosomal protein L33, chloroplastic. (66 aa)
petGCytochrome b6-f complex subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex. (37 aa)
petACytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (320 aa)
cemAChloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake into chloroplasts. Belongs to the Cema family. (229 aa)
ycf4Photosystem I assembly protein Ycf4; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family. (186 aa)
ycf3Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits; Belongs to the Ycf3 family. (168 aa)
petNCytochrome b6-f complex subunit 8; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (29 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1070 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (682 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1394 aa)
matKMaturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily. (502 aa)
petLCytochrome b6-f complex subunit 6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex. (31 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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