STRINGSTRING
VITISV_041082 VITISV_041082 D0VBC0_VITVI D0VBC0_VITVI D7SL43_VITVI D7SL43_VITVI D7T4H8_VITVI D7T4H8_VITVI E0CRG5_VITVI E0CRG5_VITVI E0CTH7_VITVI E0CTH7_VITVI E0CVS5_VITVI E0CVS5_VITVI F6H218_VITVI F6H218_VITVI F6H5G2_VITVI F6H5G2_VITVI F6HIC1_VITVI F6HIC1_VITVI F6HXL3_VITVI F6HXL3_VITVI F6HXL5_VITVI F6HXL5_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_041082Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (411 aa)
D0VBC0_VITVIChorismate mutase. (320 aa)
D7SL43_VITVIAminotran_1_2 domain-containing protein. (179 aa)
D7T4H8_VITVIPrephenate/arogenate dehydrogenase domain-containing protein. (272 aa)
E0CRG5_VITVIAminotran_1_2 domain-containing protein. (478 aa)
E0CTH7_VITVIAminotran_1_2 domain-containing protein. (419 aa)
E0CVS5_VITVIArogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (396 aa)
F6H218_VITVIAminotran_1_2 domain-containing protein. (422 aa)
F6H5G2_VITVIAminotran_1_2 domain-containing protein. (419 aa)
F6HIC1_VITVIArogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (395 aa)
F6HXL3_VITVIPrephenate/arogenate dehydrogenase domain-containing protein. (372 aa)
F6HXL5_VITVIPrephenate/arogenate dehydrogenase domain-containing protein. (310 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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