STRINGSTRING
VITISV_035583 VITISV_035583 VITISV_020600 VITISV_020600 D7TMH3_VITVI D7TMH3_VITVI D7UDC9_VITVI D7UDC9_VITVI F6H409_VITVI F6H409_VITVI F6HFL6_VITVI F6HFL6_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_035583Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (358 aa)
VITISV_020600Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (398 aa)
D7TMH3_VITVIFBPase domain-containing protein. (393 aa)
D7UDC9_VITVIGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (453 aa)
F6H409_VITVIGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (404 aa)
F6HFL6_VITVIFructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (393 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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