STRINGSTRING
VITISV_000723 VITISV_000723 VITISV_000725 VITISV_000725 D7SKE9_VITVI D7SKE9_VITVI D7SUX4_VITVI D7SUX4_VITVI D7T0U8_VITVI D7T0U8_VITVI F6HG44_VITVI F6HG44_VITVI F6I134_VITVI F6I134_VITVI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VITISV_000723Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
VITISV_000725Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (478 aa)
D7SKE9_VITVIUncharacterized protein. (254 aa)
D7SUX4_VITVIAldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (496 aa)
D7T0U8_VITVIGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (429 aa)
F6HG44_VITVIGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)
F6I134_VITVIUncharacterized protein. (324 aa)
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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