44 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7TJ97_VITVI	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (163 aa)
	F6HTN4_VITVI	Uncharacterized protein. (52 aa)
	F6HHE5_VITVI	Uncharacterized protein. (183 aa)
	F6HEM1_VITVI	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (219 aa)
	F6HEE2_VITVI	WD_REPEATS_REGION domain-containing protein. (900 aa)
	F6HAX1_VITVI	Sas10 domain-containing protein. (695 aa)
	F6H196_VITVI	Uncharacterized protein. (392 aa)
	F6GX16_VITVI	Kri1_C domain-containing protein. (637 aa)
	F6GWC0_VITVI	DUF663 domain-containing protein. (472 aa)
	F6GWB9_VITVI	Bms1-type G domain-containing protein. (757 aa)
	E0CVR6_VITVI	Uncharacterized protein. (652 aa)
	E0CTI3_VITVI	WD_REPEATS_REGION domain-containing protein. (452 aa)
	E0CQ91_VITVI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (157 aa)
	E0CNQ9_VITVI	Uncharacterized protein. (320 aa)
	D7UD95_VITVI	Bms1-type G domain-containing protein. (801 aa)
	D7UC07_VITVI	Uncharacterized protein. (156 aa)
	D7UBS0_VITVI	WD_REPEATS_REGION domain-containing protein. (536 aa)
	D7UBL1_VITVI	Uncharacterized protein. (753 aa)
	D7U817_VITVI	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (327 aa)
	D7TZJ6_VITVI	Uncharacterized protein. (755 aa)
	F6HX91_VITVI	WD_REPEATS_REGION domain-containing protein. (861 aa)
	F6HX93_VITVI	WD_REPEATS_REGION domain-containing protein. (602 aa)
	F6HZ72_VITVI	Uncharacterized protein. (1321 aa)
	F6I202_VITVI	WD_REPEATS_REGION domain-containing protein. (144 aa)
	F6I2S1_VITVI	U3snoRNP10 domain-containing protein. (845 aa)
	F6I2S2_VITVI	BP28CT domain-containing protein. (1164 aa)
	VITISV_012186	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	VITISV_011515	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (221 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (138 aa)
	VITISV_037724	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	VITISV_035308	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	D7SH86_VITVI	RRM domain-containing protein. (344 aa)
	D7SH99_VITVI	Uncharacterized protein. (114 aa)
	D7SRM5_VITVI	Uncharacterized protein. (65 aa)
	D7T6Z4_VITVI	Uncharacterized protein. (112 aa)
	D7T782_VITVI	Uncharacterized protein. (337 aa)
	D7TIN5_VITVI	WD_REPEATS_REGION domain-containing protein. (701 aa)
	D7TUQ9_VITVI	DUF663 domain-containing protein. (91 aa)
	D7TW71_VITVI	Uncharacterized protein. (236 aa)
	F6I489_VITVI	Uncharacterized protein. (198 aa)
	F6I6B2_VITVI	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (331 aa)
	F6I625_VITVI	Uncharacterized protein. (316 aa)
	F6I5P5_VITVI	Uncharacterized protein. (99 aa)
	F6I4M8_VITVI	Uncharacterized protein. (107 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SH86_VITVI	D7TIN5_VITVI	D7SH86	D7TIN5	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.802
D7SH86_VITVI	D7TW71_VITVI	D7SH86	D7TW71	RRM domain-containing protein.	Uncharacterized protein.	0.989
D7SH86_VITVI	D7U817_VITVI	D7SH86	D7U817	RRM domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.572
D7SH86_VITVI	D7UBL1_VITVI	D7SH86	D7UBL1	RRM domain-containing protein.	Uncharacterized protein.	0.967
D7SH86_VITVI	E0CNQ9_VITVI	D7SH86	E0CNQ9	RRM domain-containing protein.	Uncharacterized protein.	0.868
D7SH86_VITVI	E0CVR6_VITVI	D7SH86	E0CVR6	RRM domain-containing protein.	Uncharacterized protein.	0.955
D7SH86_VITVI	F6GX16_VITVI	D7SH86	F6GX16	RRM domain-containing protein.	Kri1_C domain-containing protein.	0.662
D7SH86_VITVI	F6H196_VITVI	D7SH86	F6H196	RRM domain-containing protein.	Uncharacterized protein.	0.440
D7SH86_VITVI	F6HAX1_VITVI	D7SH86	F6HAX1	RRM domain-containing protein.	Sas10 domain-containing protein.	0.485
D7SH86_VITVI	F6HEE2_VITVI	D7SH86	F6HEE2	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.569
D7SH86_VITVI	F6HX91_VITVI	D7SH86	F6HX91	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.840
D7SH86_VITVI	F6HZ72_VITVI	D7SH86	F6HZ72	RRM domain-containing protein.	Uncharacterized protein.	0.554
D7SH86_VITVI	F6I202_VITVI	D7SH86	F6I202	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.569
D7SH86_VITVI	F6I2S1_VITVI	D7SH86	F6I2S1	RRM domain-containing protein.	U3snoRNP10 domain-containing protein.	0.569
D7SH86_VITVI	F6I2S2_VITVI	D7SH86	F6I2S2	RRM domain-containing protein.	BP28CT domain-containing protein.	0.569
D7SH86_VITVI	F6I625_VITVI	D7SH86	F6I625	RRM domain-containing protein.	Uncharacterized protein.	0.868
D7SH86_VITVI	F6I6B2_VITVI	D7SH86	F6I6B2	RRM domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.572
D7SH99_VITVI	D7TIN5_VITVI	D7SH99	D7TIN5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.713
D7SH99_VITVI	D7TJ97_VITVI	D7SH99	D7TJ97	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.560
D7SH99_VITVI	D7TUQ9_VITVI	D7SH99	D7TUQ9	Uncharacterized protein.	DUF663 domain-containing protein.	0.777