48 items (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6GW35_VITVI	Protein kinase domain-containing protein. (450 aa)
	F6I6V1_VITVI	C2 NT-type domain-containing protein. (859 aa)
	F6I201_VITVI	Uncharacterized protein. (93 aa)
	F6I189_VITVI	Uncharacterized protein. (214 aa)
	F6I0N8_VITVI	Uncharacterized protein. (1001 aa)
	F6I0B9_VITVI	Serine/threonine-protein phosphatase. (421 aa)
	F6HZE7_VITVI	Uncharacterized protein. (296 aa)
	F6HUU7_VITVI	Protein kinase domain-containing protein. (678 aa)
	F6HSQ3_VITVI	Uncharacterized protein. (691 aa)
	F6HQA6_VITVI	Uncharacterized protein. (208 aa)
	F6HQ13_VITVI	CONSTANS-like protein 13. (394 aa)
	F6HPF4_VITVI	Uncharacterized protein. (397 aa)
	F6HPC5_VITVI	Uncharacterized protein. (522 aa)
	F6HMU6_VITVI	Uncharacterized protein. (550 aa)
	F6HKK8_VITVI	Uncharacterized protein. (171 aa)
	F6HKB3_VITVI	Uncharacterized protein. (1354 aa)
	F6HH50_VITVI	J domain-containing protein. (2609 aa)
	F6HGV1_VITVI	Uncharacterized protein. (1176 aa)
	F6HGU9_VITVI	Uncharacterized protein. (252 aa)
	F6HFD3_VITVI	PAS domain-containing protein. (616 aa)
	F6HDT9_VITVI	Uncharacterized protein. (197 aa)
	F6H7B1_VITVI	Uncharacterized protein. (1188 aa)
	F6H5T2_VITVI	ZF-HD dimerization-type domain-containing protein. (355 aa)
	F6H3B0_VITVI	PAS domain-containing protein. (613 aa)
	F6GXH9_VITVI	PAS domain-containing protein. (127 aa)
	F6GXH8_VITVI	F-box domain-containing protein. (554 aa)
	F6GW97_VITVI	Uncharacterized protein. (317 aa)
	F6GV83_VITVI	Uncharacterized protein. (172 aa)
	F6GV58_VITVI	BHLH domain-containing protein. (465 aa)
	F6GU74_VITVI	Uncharacterized protein; Belongs to the NPH3 family. (572 aa)
	F6GTW2_VITVI	Uncharacterized protein. (1004 aa)
	E0CUJ7_VITVI	Uncharacterized protein. (518 aa)
	CRY1	Photolyase/cryptochrome alpha/beta domain-containing protein. (691 aa)
	E0CQ12_VITVI	Uncharacterized protein. (766 aa)
	E0CPV3_VITVI	Uncharacterized protein. (255 aa)
	E0CNY1_VITVI	BHLH domain-containing protein. (430 aa)
	D7U5A2_VITVI	Uncharacterized protein. (334 aa)
	D7TQP0_VITVI	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (561 aa)
	D7TIR5_VITVI	Uncharacterized protein. (342 aa)
	D7TBJ4_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (433 aa)
	D7T850_VITVI	Uncharacterized protein. (361 aa)
	D7SZG3_VITVI	Photolyase/cryptochrome alpha/beta domain-containing protein. (646 aa)
	D7SU25_VITVI	Protein kinase domain-containing protein. (662 aa)
	D7STY6_VITVI	G_PROTEIN_RECEP_F2_4 domain-containing protein. (319 aa)
	D7SS27_VITVI	Uncharacterized protein. (473 aa)
	D7SP26_VITVI	Uncharacterized protein. (184 aa)
	D7SIC7_VITVI	Uncharacterized protein. (411 aa)
	VITISV_011040	Protein kinase domain-containing protein. (712 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRY1	D7SZG3_VITVI	E0CRK8	D7SZG3	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.921
CRY1	E0CUJ7_VITVI	E0CRK8	E0CUJ7	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.404
CRY1	F6GTW2_VITVI	E0CRK8	F6GTW2	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.723
CRY1	F6GV83_VITVI	E0CRK8	F6GV83	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.483
CRY1	F6GXH8_VITVI	E0CRK8	F6GXH8	Photolyase/cryptochrome alpha/beta domain-containing protein.	F-box domain-containing protein.	0.495
CRY1	F6GXH9_VITVI	E0CRK8	F6GXH9	Photolyase/cryptochrome alpha/beta domain-containing protein.	PAS domain-containing protein.	0.495
CRY1	F6H3B0_VITVI	E0CRK8	F6H3B0	Photolyase/cryptochrome alpha/beta domain-containing protein.	PAS domain-containing protein.	0.495
CRY1	F6HFD3_VITVI	E0CRK8	F6HFD3	Photolyase/cryptochrome alpha/beta domain-containing protein.	PAS domain-containing protein.	0.578
CRY1	F6I0N8_VITVI	E0CRK8	F6I0N8	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.722
D7SIC7_VITVI	F6HMU6_VITVI	D7SIC7	F6HMU6	Uncharacterized protein.	Uncharacterized protein.	0.421
D7SU25_VITVI	F6GW35_VITVI	D7SU25	F6GW35	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.473
D7SZG3_VITVI	CRY1	D7SZG3	E0CRK8	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.921
D7SZG3_VITVI	D7TBJ4_VITVI	D7SZG3	D7TBJ4	Photolyase/cryptochrome alpha/beta domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.492
D7SZG3_VITVI	E0CNY1_VITVI	D7SZG3	E0CNY1	Photolyase/cryptochrome alpha/beta domain-containing protein.	BHLH domain-containing protein.	0.514
D7SZG3_VITVI	F6GTW2_VITVI	D7SZG3	F6GTW2	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.696
D7SZG3_VITVI	F6GV83_VITVI	D7SZG3	F6GV83	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.485
D7SZG3_VITVI	F6GXH8_VITVI	D7SZG3	F6GXH8	Photolyase/cryptochrome alpha/beta domain-containing protein.	F-box domain-containing protein.	0.449
D7SZG3_VITVI	F6GXH9_VITVI	D7SZG3	F6GXH9	Photolyase/cryptochrome alpha/beta domain-containing protein.	PAS domain-containing protein.	0.449
D7SZG3_VITVI	F6H3B0_VITVI	D7SZG3	F6H3B0	Photolyase/cryptochrome alpha/beta domain-containing protein.	PAS domain-containing protein.	0.449
D7SZG3_VITVI	F6HFD3_VITVI	D7SZG3	F6HFD3	Photolyase/cryptochrome alpha/beta domain-containing protein.	PAS domain-containing protein.	0.584