(25 nodes) Seed coat development network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6HLV1_VITVI	Lipase_3 domain-containing protein. (510 aa)
	MYBCS1	Uncharacterized protein. (320 aa)
	F6HKU9_VITVI	Uncharacterized protein. (529 aa)
	F6HD46_VITVI	Uncharacterized protein. (343 aa)
	F6H8P3_VITVI	Uncharacterized protein. (214 aa)
	F6H3T5_VITVI	Uncharacterized protein. (951 aa)
	F6GV15_VITVI	Uncharacterized protein. (425 aa)
	F6GUM7_VITVI	Uncharacterized protein. (312 aa)
	E0CV25_VITVI	Uncharacterized protein. (523 aa)
	D7U5P6_VITVI	Uncharacterized protein. (97 aa)
	D7U3J7_VITVI	Uncharacterized protein. (779 aa)
	D7TW09_VITVI	Uncharacterized protein. (525 aa)
	D7T652_VITVI	Galectin domain-containing protein. (637 aa)
	D7SUP0_VITVI	WD_REPEATS_REGION domain-containing protein. (356 aa)
	D7SRT1_VITVI	Uncharacterized protein. (88 aa)
	D7SRD3_VITVI	Glyco_transf_28 domain-containing protein. (698 aa)
	D7SJ90_VITVI	DYW_deaminase domain-containing protein. (685 aa)
	F6I3A9_VITVI	Uncharacterized protein. (321 aa)
	F6I3A8_VITVI	Uncharacterized protein. (110 aa)
	F6HXK4_VITVI	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (952 aa)
	F6HSV1_VITVI	Uncharacterized protein; Belongs to the peptidase S8 family. (767 aa)
	F6HQV7_VITVI	Uncharacterized protein. (477 aa)
	F6HND4_VITVI	Sec8_exocyst domain-containing protein. (1023 aa)
	F6HND3_VITVI	Sec8_exocyst domain-containing protein. (86 aa)
	F6HLV0_VITVI	Lipase_3 domain-containing protein. (510 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7T652_VITVI	F6GV15_VITVI	D7T652	F6GV15	Galectin domain-containing protein.	Uncharacterized protein.	0.473
D7TW09_VITVI	E0CV25_VITVI	D7TW09	E0CV25	Uncharacterized protein.	Uncharacterized protein.	0.901
E0CV25_VITVI	D7TW09_VITVI	E0CV25	D7TW09	Uncharacterized protein.	Uncharacterized protein.	0.901
F6GUM7_VITVI	F6HQV7_VITVI	F6GUM7	F6HQV7	Uncharacterized protein.	Uncharacterized protein.	0.414
F6GV15_VITVI	D7T652_VITVI	F6GV15	D7T652	Uncharacterized protein.	Galectin domain-containing protein.	0.473
F6HND3_VITVI	F6HND4_VITVI	F6HND3	F6HND4	Sec8_exocyst domain-containing protein.	Sec8_exocyst domain-containing protein.	0.540
F6HND4_VITVI	F6HND3_VITVI	F6HND4	F6HND3	Sec8_exocyst domain-containing protein.	Sec8_exocyst domain-containing protein.	0.540
F6HQV7_VITVI	F6GUM7_VITVI	F6HQV7	F6GUM7	Uncharacterized protein.	Uncharacterized protein.	0.414
F6HQV7_VITVI	F6HXK4_VITVI	F6HQV7	F6HXK4	Uncharacterized protein.	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.	0.434
F6HXK4_VITVI	F6HQV7_VITVI	F6HXK4	F6HQV7	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.	Uncharacterized protein.	0.434