(33 nodes) Carotenoid metabolic process network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	F6H0H8_VITVI	Uncharacterized protein. (1042 aa)
	F6I7J6_VITVI	Uncharacterized protein. (279 aa)
	F6I640_VITVI	MFS domain-containing protein. (615 aa)
	F6HPC8_VITVI	Uncharacterized protein. (47 aa)
	LBCY2	Uncharacterized protein. (508 aa)
	LUT1	Uncharacterized protein; Belongs to the cytochrome P450 family. (546 aa)
	LBCY1	Uncharacterized protein. (497 aa)
	PSY1	Uncharacterized protein. (437 aa)
	F6HE60_VITVI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (276 aa)
	F6HB65_VITVI	Uncharacterized protein. (510 aa)
	F6H6C8_VITVI	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (306 aa)
	F6H580_VITVI	Uncharacterized protein. (396 aa)
	F6H4B6_VITVI	Uncharacterized protein. (532 aa)
	F6H3M6_VITVI	Uncharacterized protein; Belongs to the cytochrome P450 family. (534 aa)
	F6H042_VITVI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (371 aa)
	F6GWZ4_VITVI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (368 aa)
	E0CNV3_VITVI	Uncharacterized protein. (558 aa)
	D7UE66_VITVI	Ubiquinol oxidase; Belongs to the alternative oxidase family. (294 aa)
	D7U8P2_VITVI	Amino_oxidase domain-containing protein. (463 aa)
	PDS1	Amino_oxidase domain-containing protein. (582 aa)
	D7TYT8_VITVI	Uncharacterized protein. (323 aa)
	BCH1	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (299 aa)
	ZDS1	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (552 aa)
	D7TUE2_VITVI	Uncharacterized protein; Belongs to the cytochrome P450 family. (572 aa)
	D7TT26_VITVI	Uncharacterized protein. (246 aa)
	D7TGS3_VITVI	Amino_oxidase domain-containing protein. (570 aa)
	VDE1	VDE domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (437 aa)
	LECY1	Uncharacterized protein. (448 aa)
	CCD1	Carotenoid cleavage dioxygenase 1. (546 aa)
	ZEP	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (658 aa)
	D7STP8_VITVI	Uncharacterized protein; Belongs to the cytochrome P450 family. (137 aa)
	D7ST93_VITVI	Amino_oxidase domain-containing protein. (463 aa)
	D7SPU4_VITVI	Uncharacterized protein; Belongs to the cytochrome P450 family. (638 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCH1	CCD1	D7TV52	D7T313	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Carotenoid cleavage dioxygenase 1.	0.484
BCH1	D7SPU4_VITVI	D7TV52	D7SPU4	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.922
BCH1	F6H580_VITVI	D7TV52	F6H580	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.506
BCH1	F6H6C8_VITVI	D7TV52	F6H6C8	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.902
BCH1	LBCY1	D7TV52	F6HHE0	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.691
BCH1	LBCY2	D7TV52	F6HLP6	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.977
BCH1	LECY1	D7TV52	D7TCM3	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.798
BCH1	LUT1	D7TV52	F6HKE4	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.961
BCH1	PDS1	D7TV52	D7TZI5	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Amino_oxidase domain-containing protein.	0.799
BCH1	PSY1	D7TV52	F6HFX4	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.551
BCH1	VDE1	D7TV52	D7TDW3	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	VDE domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.977
BCH1	ZDS1	D7TV52	D7TUM8	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.	0.772
BCH1	ZEP	D7TV52	D7SVX6	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.	0.972
CCD1	BCH1	D7T313	D7TV52	Carotenoid cleavage dioxygenase 1.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.484
CCD1	D7SPU4_VITVI	D7T313	D7SPU4	Carotenoid cleavage dioxygenase 1.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.560
CCD1	D7U8P2_VITVI	D7T313	D7U8P2	Carotenoid cleavage dioxygenase 1.	Amino_oxidase domain-containing protein.	0.493
CCD1	LBCY2	D7T313	F6HLP6	Carotenoid cleavage dioxygenase 1.	Uncharacterized protein.	0.475
CCD1	LECY1	D7T313	D7TCM3	Carotenoid cleavage dioxygenase 1.	Uncharacterized protein.	0.481
CCD1	LUT1	D7T313	F6HKE4	Carotenoid cleavage dioxygenase 1.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.570
CCD1	PDS1	D7T313	D7TZI5	Carotenoid cleavage dioxygenase 1.	Amino_oxidase domain-containing protein.	0.678