(10 nodes) Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6HUN3_VITVI	YgbB domain-containing protein. (168 aa)
	D7SHS1_VITVI	Uncharacterized protein. (471 aa)
	D7SKY1_VITVI	Uncharacterized protein. (740 aa)
	D7T1C6_VITVI	GHMP_kinases_N domain-containing protein. (394 aa)
	D7T5H4_VITVI	Uncharacterized protein. (139 aa)
	D7TGK2_VITVI	Uncharacterized protein. (308 aa)
	F6HCW5_VITVI	Uncharacterized protein. (89 aa)
	F6HDQ9_VITVI	DYW_deaminase domain-containing protein. (684 aa)
	F6HQJ5_VITVI	Uncharacterized protein. (465 aa)
	F6HUN2_VITVI	YgbB domain-containing protein. (80 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SHS1_VITVI	D7SKY1_VITVI	D7SHS1	D7SKY1	Uncharacterized protein.	Uncharacterized protein.	0.801
D7SHS1_VITVI	D7T1C6_VITVI	D7SHS1	D7T1C6	Uncharacterized protein.	GHMP_kinases_N domain-containing protein.	0.788
D7SHS1_VITVI	D7TGK2_VITVI	D7SHS1	D7TGK2	Uncharacterized protein.	Uncharacterized protein.	0.983
D7SHS1_VITVI	F6HCW5_VITVI	D7SHS1	F6HCW5	Uncharacterized protein.	Uncharacterized protein.	0.601
D7SHS1_VITVI	F6HQJ5_VITVI	D7SHS1	F6HQJ5	Uncharacterized protein.	Uncharacterized protein.	0.833
D7SHS1_VITVI	F6HUN2_VITVI	D7SHS1	F6HUN2	Uncharacterized protein.	YgbB domain-containing protein.	0.737
D7SHS1_VITVI	F6HUN3_VITVI	D7SHS1	F6HUN3	Uncharacterized protein.	YgbB domain-containing protein.	0.780
D7SKY1_VITVI	D7SHS1_VITVI	D7SKY1	D7SHS1	Uncharacterized protein.	Uncharacterized protein.	0.801
D7SKY1_VITVI	D7T1C6_VITVI	D7SKY1	D7T1C6	Uncharacterized protein.	GHMP_kinases_N domain-containing protein.	0.793
D7SKY1_VITVI	D7T5H4_VITVI	D7SKY1	D7T5H4	Uncharacterized protein.	Uncharacterized protein.	0.765
D7SKY1_VITVI	D7TGK2_VITVI	D7SKY1	D7TGK2	Uncharacterized protein.	Uncharacterized protein.	0.895
D7SKY1_VITVI	F6HCW5_VITVI	D7SKY1	F6HCW5	Uncharacterized protein.	Uncharacterized protein.	0.765
D7SKY1_VITVI	F6HQJ5_VITVI	D7SKY1	F6HQJ5	Uncharacterized protein.	Uncharacterized protein.	0.982
D7SKY1_VITVI	F6HUN2_VITVI	D7SKY1	F6HUN2	Uncharacterized protein.	YgbB domain-containing protein.	0.891
D7SKY1_VITVI	F6HUN3_VITVI	D7SKY1	F6HUN3	Uncharacterized protein.	YgbB domain-containing protein.	0.996
D7T1C6_VITVI	D7SHS1_VITVI	D7T1C6	D7SHS1	GHMP_kinases_N domain-containing protein.	Uncharacterized protein.	0.788
D7T1C6_VITVI	D7SKY1_VITVI	D7T1C6	D7SKY1	GHMP_kinases_N domain-containing protein.	Uncharacterized protein.	0.793
D7T1C6_VITVI	D7T5H4_VITVI	D7T1C6	D7T5H4	GHMP_kinases_N domain-containing protein.	Uncharacterized protein.	0.483
D7T1C6_VITVI	D7TGK2_VITVI	D7T1C6	D7TGK2	GHMP_kinases_N domain-containing protein.	Uncharacterized protein.	0.994
D7T1C6_VITVI	F6HCW5_VITVI	D7T1C6	F6HCW5	GHMP_kinases_N domain-containing protein.	Uncharacterized protein.	0.483