(46 nodes) Stem cell population maintenance network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7SKZ6_VITVI	Sulfotransferase; Belongs to the sulfotransferase 1 family. (512 aa)
	D7SPS6_VITVI	Uncharacterized protein. (740 aa)
	D7SQ21_VITVI	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (521 aa)
	D7SQZ5_VITVI	PMD domain-containing protein. (277 aa)
	D7T1M3_VITVI	Uncharacterized protein; Belongs to the peptidase C19 family. (1116 aa)
	D7T3A6_VITVI	Uncharacterized protein; Belongs to the peptidase C19 family. (1115 aa)
	D7T4Z5_VITVI	Uncharacterized protein. (245 aa)
	D7T553_VITVI	Uncharacterized protein. (60 aa)
	D7TJC2_VITVI	RING-type domain-containing protein. (433 aa)
	D7TNI7_VITVI	Uncharacterized protein. (111 aa)
	D7TPY8_VITVI	Uncharacterized protein. (241 aa)
	D7TTW3_VITVI	Uncharacterized protein. (262 aa)
	D7U343_VITVI	Uncharacterized protein. (419 aa)
	D7U3G4_VITVI	CP-type G domain-containing protein. (596 aa)
	D7U8M2_VITVI	Uncharacterized protein; Belongs to the peptidase C19 family. (1116 aa)
	D7UBK9_VITVI	Uncharacterized protein. (291 aa)
	D7UEB9_VITVI	OBERON-like protein; Probable transcription factor. (629 aa)
	F6GU21_VITVI	Homeobox domain-containing protein. (750 aa)
	F6GWI6_VITVI	Uncharacterized protein. (276 aa)
	F6GWI8_VITVI	Uncharacterized protein. (807 aa)
	F6GWI9_VITVI	DUF3883 domain-containing protein. (690 aa)
	F6GYC2_VITVI	Uncharacterized protein. (98 aa)
	F6H2X3_VITVI	Uncharacterized protein. (1494 aa)
	F6H323_VITVI	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1197 aa)
	F6H5F1_VITVI	RING-type domain-containing protein. (537 aa)
	F6H5X3_VITVI	Uncharacterized protein; Belongs to the argonaute family. (1003 aa)
	F6HAC3_VITVI	BHLH domain-containing protein. (973 aa)
	F6HDM6_VITVI	Uncharacterized protein. (1103 aa)
	F6HED6_VITVI	Uncharacterized protein. (231 aa)
	F6HGD8_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (988 aa)
	F6HH12_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (471 aa)
	F6HHM6_VITVI	OBERON-like protein; Probable transcription factor. (587 aa)
	F6HJ63_VITVI	Protein kinase domain-containing protein. (390 aa)
	F6HJE4_VITVI	Pkinase_Tyr domain-containing protein. (122 aa)
	F6HJE5_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (937 aa)
	F6HL25_VITVI	Homeobox domain-containing protein. (642 aa)
	F6I6S3_VITVI	MATH domain-containing protein. (88 aa)
	F6HNT1_VITVI	Homeobox domain-containing protein. (498 aa)
	F6HS54_VITVI	Protein kinase domain-containing protein. (1141 aa)
	F6HTA4_VITVI	PPM-type phosphatase domain-containing protein. (787 aa)
	F6HZE8_VITVI	PPM-type phosphatase domain-containing protein. (811 aa)
	F6I6X5_VITVI	Uncharacterized protein. (329 aa)
	F6HZX4_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (977 aa)
	F6I067_VITVI	Uncharacterized protein. (370 aa)
	F6I1U1_VITVI	Uncharacterized protein; Belongs to the argonaute family. (1001 aa)
	F6I583_VITVI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1022 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SPS6_VITVI	F6HJ63_VITVI	D7SPS6	F6HJ63	Uncharacterized protein.	Protein kinase domain-containing protein.	0.818
D7T553_VITVI	D7U3G4_VITVI	D7T553	D7U3G4	Uncharacterized protein.	CP-type G domain-containing protein.	0.485
D7TNI7_VITVI	F6HGD8_VITVI	D7TNI7	F6HGD8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.718
D7U3G4_VITVI	D7T553_VITVI	D7U3G4	D7T553	CP-type G domain-containing protein.	Uncharacterized protein.	0.485
D7U3G4_VITVI	D7UBK9_VITVI	D7U3G4	D7UBK9	CP-type G domain-containing protein.	Uncharacterized protein.	0.493
D7UBK9_VITVI	D7U3G4_VITVI	D7UBK9	D7U3G4	Uncharacterized protein.	CP-type G domain-containing protein.	0.493
F6GWI6_VITVI	F6GWI8_VITVI	F6GWI6	F6GWI8	Uncharacterized protein.	Uncharacterized protein.	0.882
F6GWI6_VITVI	F6GWI9_VITVI	F6GWI6	F6GWI9	Uncharacterized protein.	DUF3883 domain-containing protein.	0.863
F6GWI8_VITVI	F6GWI6_VITVI	F6GWI8	F6GWI6	Uncharacterized protein.	Uncharacterized protein.	0.882
F6GWI8_VITVI	F6GWI9_VITVI	F6GWI8	F6GWI9	Uncharacterized protein.	DUF3883 domain-containing protein.	0.940
F6GWI9_VITVI	F6GWI6_VITVI	F6GWI9	F6GWI6	DUF3883 domain-containing protein.	Uncharacterized protein.	0.863
F6GWI9_VITVI	F6GWI8_VITVI	F6GWI9	F6GWI8	DUF3883 domain-containing protein.	Uncharacterized protein.	0.940
F6H323_VITVI	F6H5X3_VITVI	F6H323	F6H5X3	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein; Belongs to the argonaute family.	0.439
F6H323_VITVI	F6I1U1_VITVI	F6H323	F6I1U1	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein; Belongs to the argonaute family.	0.439
F6H5X3_VITVI	F6H323_VITVI	F6H5X3	F6H323	Uncharacterized protein; Belongs to the argonaute family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.439
F6HGD8_VITVI	D7TNI7_VITVI	F6HGD8	D7TNI7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	Uncharacterized protein.	0.718
F6HJ63_VITVI	D7SPS6_VITVI	F6HJ63	D7SPS6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.818
F6I1U1_VITVI	F6H323_VITVI	F6I1U1	F6H323	Uncharacterized protein; Belongs to the argonaute family.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.439